The 2.0 version of rSNPBase

Variant report

Variant rs56239295
Chromosome Location chr1:184039735-184039736
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184021600-184050400 Weak transcription Gastric stomach
2 chr1:184021600-184055800 Weak transcription Esophagus oesophagus
3 chr1:184021800-184042000 Weak transcription Fetal Muscle Leg muscle
4 chr1:184022000-184042000 Weak transcription Psoas Muscle Psoas
5 chr1:184022000-184043600 Weak transcription Fetal Brain Male brain
6 chr1:184022200-184044000 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr1:184022200-184048800 Weak transcription Duodenum Mucosa Duodenum
8 chr1:184022200-184053200 Weak transcription Fetal Intestine Small intestine
9 chr1:184023000-184041000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:184023000-184041400 Weak transcription Liver Liver
11 chr1:184023000-184044000 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr1:184023000-184044200 Weak transcription HMEC breast
13 chr1:184023000-184045200 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr1:184023400-184052000 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr1:184023600-184044200 Weak transcription Brain Anterior Caudate brain
16 chr1:184024400-184045600 Weak transcription Small Intestine intestine
17 chr1:184024600-184043800 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr1:184024600-184044400 Weak transcription Ovary ovary
19 chr1:184024600-184063400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr1:184024600-184069400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:184024600-184079400 Weak transcription Thymus Thymus
22 chr1:184024800-184043200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr1:184024800-184043600 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr1:184025400-184043400 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:184025400-184043800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:184026400-184044400 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr1:184026600-184043800 Weak transcription Hela-S3 cervix
28 chr1:184026600-184050400 Weak transcription Aorta Aorta
29 chr1:184026800-184041800 Weak transcription NHEK skin
30 chr1:184026800-184043600 Weak transcription Colon Smooth Muscle Colon
31 chr1:184026800-184044000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr1:184026800-184044400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr1:184026800-184052200 Weak transcription HepG2 liver
34 chr1:184029000-184043400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:184029000-184045000 Weak transcription Fetal Stomach stomach
36 chr1:184029000-184045800 Weak transcription Fetal Muscle Trunk muscle
37 chr1:184029000-184048600 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr1:184029400-184045800 Weak transcription Fetal Brain Female brain
39 chr1:184029600-184043400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:184029600-184044000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:184029600-184044000 Weak transcription Fetal Thymus thymus
42 chr1:184029600-184044200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:184029600-184044200 Weak transcription Fetal Intestine Large intestine
44 chr1:184029600-184046600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:184029600-184048400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr1:184029800-184062000 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr1:184030800-184051600 Weak transcription HSMMtube muscle
48 chr1:184031000-184042200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:184031000-184044200 Weak transcription Rectal Smooth Muscle rectum
50 chr1:184031000-184044400 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015