The 2.0 version of rSNPBase

Variant report

Variant rs56833752
Chromosome Location chr11:108071482-108071483
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:108017000-108075000 Strong transcription Dnd41 blood
2 chr11:108026200-108072200 Strong transcription Fetal Thymus thymus
3 chr11:108032600-108075000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:108040400-108074000 Weak transcription Fetal Brain Male brain
5 chr11:108041600-108074000 Weak transcription Small Intestine intestine
6 chr11:108050000-108074800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr11:108053800-108075600 Weak transcription Fetal Heart heart
8 chr11:108057600-108075000 Weak transcription Colonic Mucosa Colon
9 chr11:108060000-108077000 Weak transcription Brain Cingulate Gyrus brain
10 chr11:108060000-108077000 Weak transcription NHLF lung
11 chr11:108060200-108076800 Weak transcription Hela-S3 cervix
12 chr11:108061800-108075000 Weak transcription Ovary ovary
13 chr11:108062600-108090800 Weak transcription Colon Smooth Muscle Colon
14 chr11:108063400-108077200 Weak transcription NHDF-Ad bronchial
15 chr11:108065200-108074400 Weak transcription Fetal Kidney kidney
16 chr11:108065400-108075400 Genic enhancers Primary T helper cells PMA-I stimulated --
17 chr11:108067200-108073200 Weak transcription HUVEC blood vessel
18 chr11:108067200-108073600 Weak transcription Fetal Lung lung
19 chr11:108067200-108076800 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr11:108067400-108076400 Weak transcription Rectal Smooth Muscle rectum
21 chr11:108067400-108077000 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr11:108067600-108073000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr11:108067600-108073400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr11:108067600-108076800 Weak transcription Adipose Nuclei Adipose
25 chr11:108067800-108074400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr11:108067800-108074600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr11:108068000-108074200 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr11:108068000-108074800 Genic enhancers Primary T helper cells fromperipheralblood blood
29 chr11:108068000-108075000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr11:108068200-108074000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr11:108068400-108073200 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr11:108068800-108074600 Weak transcription HepG2 liver
33 chr11:108068800-108074800 Weak transcription Liver Liver
34 chr11:108069000-108074800 Genic enhancers Primary T helper naive cells fromperipheralblood blood
35 chr11:108069000-108074800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr11:108069200-108072000 Strong transcription Fetal Brain Female brain
37 chr11:108069200-108075400 Genic enhancers Primary T cells fromperipheralblood blood
38 chr11:108069400-108071800 Strong transcription Thymus Thymus
39 chr11:108069400-108071800 Enhancers NHEK skin
40 chr11:108069400-108073800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr11:108069600-108071600 Strong transcription Rectal Mucosa Donor 29 rectum
42 chr11:108069600-108072600 Enhancers Stomach Mucosa stomach
43 chr11:108069600-108072800 Genic enhancers Primary hematopoietic stem cells short term culture blood
44 chr11:108069600-108072800 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr11:108069600-108072800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr11:108069800-108072400 Enhancers Primary monocytes fromperipheralblood blood
47 chr11:108070000-108071600 Enhancers Monocytes-CD14+_RO01746 blood
48 chr11:108070000-108074000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr11:108070000-108075200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr11:108070200-108071600 Genic enhancers Primary B cells from cord blood blood

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Last update: Aug 31, 2015