The 2.0 version of rSNPBase

Variant report

Variant rs11821287
Chromosome Location chr11:108217052-108217053
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:108094800-108244400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:108145800-108235400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr11:108148200-108225600 Weak transcription Esophagus oesophagus
4 chr11:108148600-108225600 Weak transcription Gastric stomach
5 chr11:108176400-108225400 Weak transcription Right Ventricle heart
6 chr11:108182400-108220800 Weak transcription Aorta Aorta
7 chr11:108182400-108222200 Weak transcription Pancreas Pancrea
8 chr11:108182400-108223800 Weak transcription Small Intestine intestine
9 chr11:108192000-108222200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr11:108192200-108225400 Weak transcription Brain Angular Gyrus brain
11 chr11:108193800-108224600 Weak transcription Fetal Heart heart
12 chr11:108195400-108226200 Strong transcription Primary T cells from cord blood blood
13 chr11:108200400-108224600 Weak transcription H9 Cell Line embryonic stem cell
14 chr11:108200600-108222000 Weak transcription Spleen Spleen
15 chr11:108200600-108222200 Weak transcription Fetal Intestine Small intestine
16 chr11:108201400-108219600 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr11:108201400-108221200 Weak transcription Fetal Brain Male brain
18 chr11:108202200-108225200 Weak transcription Colonic Mucosa Colon
19 chr11:108202800-108221200 Weak transcription Brain Cingulate Gyrus brain
20 chr11:108203000-108222000 Weak transcription Placenta Amnion Placenta Amnion
21 chr11:108203200-108224400 Weak transcription Psoas Muscle Psoas
22 chr11:108207000-108220000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr11:108207000-108221800 Weak transcription Lung lung
24 chr11:108207000-108224400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr11:108207000-108225400 Weak transcription Fetal Kidney kidney
26 chr11:108207200-108218000 Weak transcription HepG2 liver
27 chr11:108207400-108224400 Weak transcription Fetal Brain Female brain
28 chr11:108207400-108234000 Weak transcription NHLF lung
29 chr11:108207600-108217200 Weak transcription Brain Anterior Caudate brain
30 chr11:108207600-108219600 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr11:108207600-108222000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr11:108207600-108222200 Weak transcription Rectal Smooth Muscle rectum
33 chr11:108207600-108222200 Weak transcription NH-A brain
34 chr11:108207600-108222400 Weak transcription Brain Substantia Nigra brain
35 chr11:108207800-108217200 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr11:108207800-108219600 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr11:108207800-108219800 Weak transcription H1 Cell Line embryonic stem cell
38 chr11:108207800-108220800 Weak transcription NHDF-Ad bronchial
39 chr11:108207800-108224400 Weak transcription HSMMtube muscle
40 chr11:108208000-108217200 Weak transcription Colon Smooth Muscle Colon
41 chr11:108208000-108220800 Weak transcription Brain Inferior Temporal Lobe brain
42 chr11:108208000-108224400 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr11:108208000-108224800 Weak transcription HUVEC blood vessel
44 chr11:108208200-108217400 Weak transcription GM12878-XiMat blood
45 chr11:108208200-108218200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr11:108208200-108225000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr11:108208400-108217200 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr11:108208400-108217400 Weak transcription Primary hematopoietic stem cells blood
49 chr11:108208400-108217400 Weak transcription Fetal Lung lung
50 chr11:108208400-108217600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015