Variant report

Variant rs568439523
Chromosome Location chr9:140499133-140499134
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140496400-140499400 Enhancers Primary monocytes fromperipheralblood blood
2 chr9:140497400-140499400 Enhancers Spleen Spleen
3 chr9:140497600-140499600 Weak transcription Brain Substantia Nigra brain
4 chr9:140497600-140500200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr9:140498000-140499600 Enhancers Skeletal Muscle Female skeletal muscle
6 chr9:140498000-140500000 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr9:140498400-140499200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
8 chr9:140498400-140499200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr9:140498400-140499200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
10 chr9:140498400-140499200 Bivalent Enhancer Fetal Muscle Leg muscle
11 chr9:140498400-140499400 Enhancers Placenta Placenta
12 chr9:140498400-140499600 Enhancers Fetal Lung lung
13 chr9:140498600-140499200 Enhancers Primary B cells from cord blood blood
14 chr9:140498600-140499200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr9:140498600-140499400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr9:140498600-140499400 Enhancers Brain Hippocampus Middle brain
17 chr9:140498600-140499400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
18 chr9:140498600-140499400 Enhancers Fetal Thymus thymus
19 chr9:140498600-140500200 Enhancers Adipose Nuclei Adipose
20 chr9:140498800-140499200 Flanking Active TSS H1 Cell Line embryonic stem cell
21 chr9:140498800-140499200 Flanking Active TSS Primary hematopoietic stem cells blood
22 chr9:140498800-140499200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
23 chr9:140498800-140499200 Enhancers Primary T helper cells PMA-I stimulated --
24 chr9:140498800-140499200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
25 chr9:140498800-140499200 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr9:140498800-140499200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr9:140498800-140499200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr9:140498800-140499200 Enhancers Stomach Mucosa stomach
29 chr9:140498800-140499200 Enhancers Dnd41 blood
30 chr9:140498800-140499200 Flanking Active TSS Hela-S3 cervix
31 chr9:140498800-140500400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
32 chr9:140498800-140500800 Active TSS Esophagus oesophagus
33 chr9:140498800-140500800 Active TSS Rectal Mucosa Donor 31 rectum
34 chr9:140498800-140501000 Active TSS HSMM muscle
35 chr9:140499000-140499200 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr9:140499000-140499200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr9:140499000-140499200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr9:140499000-140499200 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr9:140499000-140499200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
40 chr9:140499000-140499200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
41 chr9:140499000-140499200 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
42 chr9:140499000-140499200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
43 chr9:140499000-140499200 Flanking Active TSS Primary B cells from peripheral blood blood
44 chr9:140499000-140499200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
45 chr9:140499000-140499200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
46 chr9:140499000-140499200 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
47 chr9:140499000-140499200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
48 chr9:140499000-140499200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
49 chr9:140499000-140499200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
50 chr9:140499000-140499200 Flanking Active TSS Brain Germinal Matrix brain

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