Variant report

Variant rs56865417
Chromosome Location chr3:143616473-143616474
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:143603600-143616800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr3:143611600-143616800 Weak transcription Fetal Stomach stomach
3 chr3:143615000-143617600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr3:143615200-143616600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:143615200-143617200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr3:143615400-143617200 Enhancers Osteobl bone
7 chr3:143615800-143616600 Weak transcription HSMMtube muscle
8 chr3:143616200-143616800 Enhancers Brain Germinal Matrix brain
9 chr3:143616200-143617000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr3:143616200-143617600 Enhancers NHDF-Ad bronchial
11 chr3:143616200-143618000 Enhancers NHLF lung
12 chr3:143616400-143616600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
13 chr3:143616400-143616600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr3:143616400-143616600 Enhancers Brain Anterior Caudate brain
15 chr3:143616400-143616600 Flanking Active TSS Brain Cingulate Gyrus brain
16 chr3:143616400-143616600 Enhancers Brain Substantia Nigra brain
17 chr3:143616400-143616600 Active TSS NH-A brain
18 chr3:143616400-143616800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr3:143616400-143616800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
20 chr3:143616400-143616800 Flanking Active TSS Fetal Brain Male brain
21 chr3:143616400-143617000 Flanking Active TSS Brain Hippocampus Middle brain
22 chr3:143616400-143617000 Enhancers Fetal Heart heart
23 chr3:143616400-143617000 Enhancers HMEC breast
24 chr3:143616400-143617200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr3:143616400-143617200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr3:143616400-143617200 Enhancers Brain Inferior Temporal Lobe brain
27 chr3:143616400-143617200 Enhancers Fetal Intestine Small intestine
28 chr3:143616400-143617200 Enhancers NHEK skin
29 chr3:143616400-143617400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr3:143616400-143617400 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr3:143616400-143617400 Enhancers Stomach Mucosa stomach
32 chr3:143616400-143617600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr3:143616400-143617600 Enhancers Brain Angular Gyrus brain
34 chr3:143616400-143617600 Enhancers Fetal Lung lung

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