The 2.0 version of rSNPBase

Variant report

Variant rs56872702
Chromosome Location chr13:51538233-51538234
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:51491600-51551000 Weak transcription Small Intestine intestine
2 chr13:51503200-51549400 Weak transcription Psoas Muscle Psoas
3 chr13:51503600-51551800 Strong transcription Dnd41 blood
4 chr13:51504400-51551800 Strong transcription Fetal Thymus thymus
5 chr13:51506600-51538600 Weak transcription K562 blood
6 chr13:51509400-51541400 Weak transcription A549 lung
7 chr13:51509600-51538800 Weak transcription Right Ventricle heart
8 chr13:51509600-51542400 Weak transcription NHEK skin
9 chr13:51509800-51543200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr13:51509800-51550200 Weak transcription Brain Cingulate Gyrus brain
11 chr13:51510000-51539600 Weak transcription Fetal Heart heart
12 chr13:51510000-51545400 Weak transcription Placenta Amnion Placenta Amnion
13 chr13:51510200-51543800 Weak transcription Pancreas Pancrea
14 chr13:51510200-51545000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr13:51510200-51546200 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr13:51512000-51546200 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr13:51512200-51539400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr13:51512400-51543800 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr13:51512800-51542400 Weak transcription Fetal Brain Male brain
20 chr13:51513000-51543800 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr13:51513000-51552200 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr13:51513200-51540600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr13:51513200-51546800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr13:51516400-51548800 Weak transcription Gastric stomach
25 chr13:51517200-51543800 Weak transcription Spleen Spleen
26 chr13:51518000-51550400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr13:51518000-51551200 Weak transcription Placenta Placenta
28 chr13:51518200-51539000 Weak transcription Esophagus oesophagus
29 chr13:51518200-51543800 Weak transcription Lung lung
30 chr13:51518600-51539000 Weak transcription Ovary ovary
31 chr13:51518600-51552000 Weak transcription Fetal Brain Female brain
32 chr13:51518800-51549000 Weak transcription Fetal Intestine Small intestine
33 chr13:51521400-51538600 Weak transcription Aorta Aorta
34 chr13:51521400-51549000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr13:51523600-51555200 Weak transcription HSMMtube muscle
36 chr13:51523800-51546000 Weak transcription Muscle Satellite Cultured Cells --
37 chr13:51523800-51550600 Weak transcription HSMM muscle
38 chr13:51524400-51538800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr13:51524600-51548400 Weak transcription NHDF-Ad bronchial
40 chr13:51524600-51550400 Weak transcription Rectal Smooth Muscle rectum
41 chr13:51524800-51539200 Weak transcription Liver Liver
42 chr13:51524800-51552200 Weak transcription Colonic Mucosa Colon
43 chr13:51525400-51547400 Weak transcription Osteobl bone
44 chr13:51525600-51543800 Weak transcription Fetal Stomach stomach
45 chr13:51525800-51547400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr13:51526200-51540200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr13:51526200-51544600 Weak transcription Colon Smooth Muscle Colon
48 chr13:51526200-51549000 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr13:51526200-51550000 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr13:51527600-51543800 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015