Variant report
Variant | rs56897220 |
---|---|
Chromosome Location | chr7:108501904-108501905 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:108501024..108502651-chr7:108503799..108506089,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10224425 | 1.00[ASN][1000 genomes] |
rs1100226 | 0.97[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1100227 | 0.97[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12705501 | 1.00[ASN][1000 genomes] |
rs12705520 | 0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1404686 | 0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1404687 | 1.00[ASN][1000 genomes] |
rs1404689 | 1.00[ASN][1000 genomes] |
rs1525181 | 0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1525183 | 0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1525198 | 1.00[ASN][1000 genomes] |
rs1525200 | 1.00[ASN][1000 genomes] |
rs1525202 | 1.00[ASN][1000 genomes] |
rs1568856 | 1.00[ASN][1000 genomes] |
rs1568857 | 1.00[ASN][1000 genomes] |
rs1568858 | 1.00[ASN][1000 genomes] |
rs1830037 | 0.94[ASN][1000 genomes] |
rs2396032 | 0.97[ASN][1000 genomes] |
rs2396034 | 0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4730333 | 0.97[ASN][1000 genomes] |
rs4730335 | 0.87[ASN][1000 genomes] |
rs58749654 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6466256 | 0.97[ASN][1000 genomes] |
rs6976706 | 1.00[ASN][1000 genomes] |
rs7384561 | 1.00[ASN][1000 genomes] |
rs7781125 | 1.00[ASN][1000 genomes] |
rs7781585 | 1.00[ASN][1000 genomes] |
rs7782139 | 0.97[ASN][1000 genomes] |
rs7786936 | 1.00[ASN][1000 genomes] |
rs848409 | 0.97[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs848410 | 0.97[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs848412 | 0.97[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs848415 | 0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9649313 | 0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv817371 | chr7:108199882-108649799 | Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 36 gene(s) | inside rSNPs | diseases |
2 | nsv1031096 | chr7:108334543-108596014 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
3 | nsv888945 | chr7:108445757-108521842 | ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
4 | esv3391200 | chr7:108501216-108502064 | Weak transcription Enhancers | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:108501800-108503200 | Weak transcription | Right Ventricle | heart |