The 2.0 version of rSNPBase

Variant report

Variant rs56900755
Chromosome Location chr6:36565459-36565460
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:36561200-36566600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:36561800-36565600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:36561800-36565800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
4 chr6:36562200-36568600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
5 chr6:36562200-36569600 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
6 chr6:36562400-36569000 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
7 chr6:36562600-36567000 Transcr. at gene 5' and 3' Fetal Lung lung
8 chr6:36562600-36567000 Transcr. at gene 5' and 3' A549 lung
9 chr6:36562600-36570400 Transcr. at gene 5' and 3' Dnd41 blood
10 chr6:36562600-36571800 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr6:36562800-36566800 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr6:36562800-36566800 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
13 chr6:36562800-36567800 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
14 chr6:36562800-36568200 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
15 chr6:36562800-36568200 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
16 chr6:36562800-36568200 Transcr. at gene 5' and 3' NHEK skin
17 chr6:36562800-36568600 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr6:36562800-36568600 Transcr. at gene 5' and 3' iPS-18 Cell Line embryonic stem cell
19 chr6:36562800-36569000 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
20 chr6:36563000-36569400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:36563000-36569600 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr6:36563200-36566800 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
23 chr6:36563200-36568600 Transcr. at gene 5' and 3' Osteobl bone
24 chr6:36563400-36566600 Transcr. at gene 5' and 3' Fetal Thymus thymus
25 chr6:36563600-36567200 Transcr. at gene 5' and 3' ES-UCSF4 Cell Line embryonic stem cell
26 chr6:36563800-36566800 Transcr. at gene 5' and 3' Primary mononuclear cells fromperipheralblood Blood
27 chr6:36563800-36567000 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
28 chr6:36564000-36567400 Transcr. at gene 5' and 3' iPS-15b Cell Line embryonic stem cell
29 chr6:36564000-36568600 Transcr. at gene 5' and 3' Primary T helper naive cells from peripheral blood blood
30 chr6:36564000-36569200 Transcr. at gene 5' and 3' HMEC breast
31 chr6:36564000-36570400 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
32 chr6:36564000-36571600 Transcr. at gene 5' and 3' GM12878-XiMat blood
33 chr6:36564200-36566000 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
34 chr6:36564200-36566600 Transcr. at gene 5' and 3' Cortex derived primary cultured neurospheres brain
35 chr6:36564200-36566800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
36 chr6:36564200-36567200 Transcr. at gene 5' and 3' K562 blood
37 chr6:36564200-36568000 Transcr. at gene 5' and 3' HSMM muscle
38 chr6:36564200-36568200 Transcr. at gene 5' and 3' hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr6:36564200-36568600 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr6:36564200-36568600 Transcr. at gene 5' and 3' NH-A brain
41 chr6:36564400-36566000 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
42 chr6:36564400-36566000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells blood
43 chr6:36564400-36566000 Transcr. at gene 5' and 3' Placenta Placenta
44 chr6:36564400-36566000 Transcr. at gene 5' and 3' Sigmoid Colon Sigmoid Colon
45 chr6:36564400-36566600 Transcr. at gene 5' and 3' Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr6:36564400-36567200 Transcr. at gene 5' and 3' Fetal Kidney kidney
47 chr6:36564400-36567400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr6:36564400-36568000 Transcr. at gene 5' and 3' Hela-S3 cervix
49 chr6:36564400-36568600 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
50 chr6:36564400-36568600 Transcr. at gene 5' and 3' HepG2 liver

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Last update: Aug 31, 2015