The 2.0 version of rSNPBase

Variant report

Variant rs57019473
Chromosome Location chr3:51480305-51480306
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:51458200-51489400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:51458200-51515000 Weak transcription Fetal Brain Male brain
3 chr3:51458400-51500200 Weak transcription Psoas Muscle Psoas
4 chr3:51458800-51503800 Weak transcription Placenta Amnion Placenta Amnion
5 chr3:51467800-51482000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr3:51467800-51502000 Weak transcription HMEC breast
7 chr3:51467800-51524000 Weak transcription Small Intestine intestine
8 chr3:51470600-51498400 Weak transcription Colon Smooth Muscle Colon
9 chr3:51472000-51498000 Weak transcription NHEK skin
10 chr3:51474200-51497600 Weak transcription Ovary ovary
11 chr3:51475800-51484400 Weak transcription A549 lung
12 chr3:51475800-51495800 Weak transcription Fetal Kidney kidney
13 chr3:51475800-51496200 Weak transcription Spleen Spleen
14 chr3:51475800-51498600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr3:51475800-51499200 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr3:51475800-51500400 Weak transcription K562 blood
17 chr3:51476000-51480400 Weak transcription Brain Anterior Caudate brain
18 chr3:51476000-51481600 Weak transcription Rectal Smooth Muscle rectum
19 chr3:51476000-51481600 Weak transcription HepG2 liver
20 chr3:51476000-51482000 Weak transcription NH-A brain
21 chr3:51476000-51482800 Weak transcription GM12878-XiMat blood
22 chr3:51476000-51483200 Weak transcription NHLF lung
23 chr3:51476000-51483800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr3:51476000-51484600 Weak transcription Fetal Lung lung
25 chr3:51476000-51484600 Weak transcription HSMM muscle
26 chr3:51476000-51488200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr3:51476000-51489200 Weak transcription Thymus Thymus
28 chr3:51476000-51489400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr3:51476000-51489600 Weak transcription H9 Cell Line embryonic stem cell
30 chr3:51476000-51490000 Weak transcription H1 Cell Line embryonic stem cell
31 chr3:51476000-51490000 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr3:51476000-51495800 Weak transcription Brain Angular Gyrus brain
33 chr3:51476000-51496200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr3:51476000-51496200 Weak transcription Left Ventricle heart
35 chr3:51476000-51496200 Weak transcription Pancreas Pancrea
36 chr3:51476000-51496200 Weak transcription HUVEC blood vessel
37 chr3:51476000-51497000 Weak transcription NHDF-Ad bronchial
38 chr3:51476000-51497200 Weak transcription Hela-S3 cervix
39 chr3:51476000-51497400 Weak transcription Brain Substantia Nigra brain
40 chr3:51476000-51497600 Weak transcription Aorta Aorta
41 chr3:51476000-51497600 Weak transcription Gastric stomach
42 chr3:51476000-51498600 Weak transcription Brain Cingulate Gyrus brain
43 chr3:51476000-51499800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr3:51476000-51506000 Weak transcription Brain Inferior Temporal Lobe brain
45 chr3:51476200-51480400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr3:51476200-51489200 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr3:51476200-51495600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr3:51476200-51495800 Weak transcription Lung lung
49 chr3:51476200-51500000 Weak transcription Muscle Satellite Cultured Cells --
50 chr3:51476200-51500200 Weak transcription Osteobl bone

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Last update: Aug 31, 2015