The 2.0 version of rSNPBase

Variant report

Variant rs72953421
Chromosome Location chr3:51711127-51711128
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:51706200-51712800 Weak transcription Aorta Aorta
2 chr3:51706400-51733400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr3:51706400-51741000 Weak transcription H9 Cell Line embryonic stem cell
4 chr3:51706600-51711600 Weak transcription Fetal Brain Female brain
5 chr3:51706600-51714000 Weak transcription Right Atrium heart
6 chr3:51706600-51715800 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr3:51706600-51716600 Weak transcription A549 lung
8 chr3:51706600-51719800 Weak transcription Psoas Muscle Psoas
9 chr3:51706600-51721200 Weak transcription Fetal Brain Male brain
10 chr3:51706600-51724600 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr3:51706600-51739600 Weak transcription Small Intestine intestine
12 chr3:51706800-51712800 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr3:51706800-51714800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr3:51706800-51715200 Enhancers Primary T helper naive cells from peripheral blood blood
15 chr3:51706800-51715400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr3:51706800-51715600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
17 chr3:51707000-51714600 Weak transcription Hela-S3 cervix
18 chr3:51707000-51715600 Weak transcription K562 blood
19 chr3:51707200-51712800 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr3:51707400-51712200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr3:51707400-51712400 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr3:51707600-51714400 Weak transcription Stomach Mucosa stomach
23 chr3:51707600-51714600 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr3:51707800-51711600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr3:51707800-51714800 Weak transcription Fetal Heart heart
26 chr3:51707800-51715800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr3:51707800-51716000 Weak transcription Fetal Kidney kidney
28 chr3:51707800-51740400 Strong transcription Fetal Intestine Small intestine
29 chr3:51708000-51712200 Strong transcription Fetal Adrenal Gland Adrenal Gland
30 chr3:51708000-51713200 Genic enhancers Primary B cells from peripheral blood blood
31 chr3:51708000-51714400 Strong transcription Fetal Muscle Leg muscle
32 chr3:51708000-51714800 Genic enhancers Primary T regulatory cells fromperipheralblood blood
33 chr3:51708000-51715600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr3:51708000-51718600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr3:51708200-51712600 Genic enhancers Skeletal Muscle Female skeletal muscle
36 chr3:51708200-51712800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
37 chr3:51708200-51713800 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr3:51708200-51713800 Strong transcription Cortex derived primary cultured neurospheres brain
39 chr3:51708200-51714000 Strong transcription Primary monocytes fromperipheralblood blood
40 chr3:51708200-51714200 Strong transcription Adipose Nuclei Adipose
41 chr3:51708200-51714800 Strong transcription Duodenum Mucosa Duodenum
42 chr3:51708200-51715400 Genic enhancers Primary T cells fromperipheralblood blood
43 chr3:51708200-51715400 Genic enhancers Spleen Spleen
44 chr3:51708200-51715600 Strong transcription Fetal Stomach stomach
45 chr3:51708400-51712800 Strong transcription Duodenum Smooth Muscle Duodenum
46 chr3:51708400-51713000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr3:51708400-51713000 Strong transcription Sigmoid Colon Sigmoid Colon
48 chr3:51708400-51713200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr3:51708400-51714000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr3:51708400-51714200 Strong transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015