The 2.0 version of rSNPBase

Variant report

Variant rs9838942
Chromosome Location chr3:51645997-51645998
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:51600800-51654600 Weak transcription Stomach Mucosa stomach
2 chr3:51625200-51655400 Weak transcription Gastric stomach
3 chr3:51625400-51663400 Weak transcription Right Ventricle heart
4 chr3:51625600-51654000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr3:51625600-51654000 Weak transcription Ovary ovary
6 chr3:51625600-51655400 Weak transcription Aorta Aorta
7 chr3:51625600-51658200 Weak transcription Fetal Muscle Trunk muscle
8 chr3:51625800-51647000 Weak transcription Fetal Brain Female brain
9 chr3:51625800-51651000 Weak transcription Brain Hippocampus Middle brain
10 chr3:51625800-51654000 Weak transcription Left Ventricle heart
11 chr3:51625800-51655200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr3:51625800-51655400 Weak transcription Lung lung
13 chr3:51625800-51655800 Weak transcription Brain Inferior Temporal Lobe brain
14 chr3:51626000-51651400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr3:51626000-51654600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr3:51626000-51656600 Weak transcription Placenta Placenta
17 chr3:51626400-51651000 Weak transcription Brain Anterior Caudate brain
18 chr3:51628800-51660800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr3:51629600-51652200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr3:51629800-51654000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr3:51629800-51655200 Weak transcription Fetal Lung lung
22 chr3:51630200-51651200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr3:51630400-51661400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr3:51630800-51647800 Weak transcription Adipose Nuclei Adipose
25 chr3:51630800-51661400 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr3:51631000-51653800 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr3:51631000-51655400 Weak transcription Fetal Muscle Leg muscle
28 chr3:51631000-51661400 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr3:51631000-51661600 Weak transcription Primary T cells fromperipheralblood blood
30 chr3:51631000-51661600 Weak transcription Fetal Thymus thymus
31 chr3:51631400-51653800 Weak transcription Primary hematopoietic stem cells blood
32 chr3:51631800-51660800 Weak transcription Primary B cells from cord blood blood
33 chr3:51633000-51655800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr3:51634600-51655200 Weak transcription Fetal Stomach stomach
35 chr3:51636200-51661200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr3:51636600-51655200 Weak transcription Primary monocytes fromperipheralblood blood
37 chr3:51637600-51660800 Weak transcription Primary B cells from peripheral blood blood
38 chr3:51638200-51651200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr3:51638800-51652400 Weak transcription HepG2 liver
40 chr3:51640200-51656400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr3:51640600-51650400 Weak transcription Liver Liver
42 chr3:51640600-51654600 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr3:51640600-51655200 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr3:51640600-51661000 Weak transcription Dnd41 blood
45 chr3:51640600-51661200 Weak transcription Thymus Thymus
46 chr3:51640600-51663200 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr3:51640800-51654000 Weak transcription Primary T cells from cord blood blood
48 chr3:51643000-51652400 Weak transcription Fetal Intestine Small intestine
49 chr3:51643000-51654600 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr3:51643000-51660800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015