The 2.0 version of rSNPBase

Variant report

Variant rs9866604
Chromosome Location chr3:51642626-51642627
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:51600800-51654600 Weak transcription Stomach Mucosa stomach
2 chr3:51602800-51643800 Weak transcription Right Atrium heart
3 chr3:51613400-51643600 Weak transcription Pancreas Pancrea
4 chr3:51625200-51655400 Weak transcription Gastric stomach
5 chr3:51625400-51663400 Weak transcription Right Ventricle heart
6 chr3:51625600-51643400 Weak transcription Esophagus oesophagus
7 chr3:51625600-51654000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr3:51625600-51654000 Weak transcription Ovary ovary
9 chr3:51625600-51655400 Weak transcription Aorta Aorta
10 chr3:51625600-51658200 Weak transcription Fetal Muscle Trunk muscle
11 chr3:51625800-51645200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr3:51625800-51647000 Weak transcription Fetal Brain Female brain
13 chr3:51625800-51651000 Weak transcription Brain Hippocampus Middle brain
14 chr3:51625800-51654000 Weak transcription Left Ventricle heart
15 chr3:51625800-51655200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr3:51625800-51655400 Weak transcription Lung lung
17 chr3:51625800-51655800 Weak transcription Brain Inferior Temporal Lobe brain
18 chr3:51626000-51651400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr3:51626000-51654600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr3:51626000-51656600 Weak transcription Placenta Placenta
21 chr3:51626400-51651000 Weak transcription Brain Anterior Caudate brain
22 chr3:51626600-51644800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr3:51628800-51660800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr3:51629400-51644800 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr3:51629600-51643000 Weak transcription Spleen Spleen
26 chr3:51629600-51643200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr3:51629600-51643200 Weak transcription Hela-S3 cervix
28 chr3:51629600-51645800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr3:51629600-51652200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr3:51629800-51644200 Weak transcription Duodenum Mucosa Duodenum
31 chr3:51629800-51654000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr3:51629800-51655200 Weak transcription Fetal Lung lung
33 chr3:51630000-51643200 Weak transcription Stomach Smooth Muscle stomach
34 chr3:51630200-51651200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:51630400-51661400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr3:51630800-51643200 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr3:51630800-51644600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr3:51630800-51647800 Weak transcription Adipose Nuclei Adipose
39 chr3:51630800-51661400 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr3:51631000-51653800 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr3:51631000-51655400 Weak transcription Fetal Muscle Leg muscle
42 chr3:51631000-51661400 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr3:51631000-51661600 Weak transcription Primary T cells fromperipheralblood blood
44 chr3:51631000-51661600 Weak transcription Fetal Thymus thymus
45 chr3:51631400-51653800 Weak transcription Primary hematopoietic stem cells blood
46 chr3:51631800-51660800 Weak transcription Primary B cells from cord blood blood
47 chr3:51633000-51655800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr3:51634600-51655200 Weak transcription Fetal Stomach stomach
49 chr3:51636200-51661200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr3:51636600-51655200 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015