The 2.0 version of rSNPBase

Variant report

Variant rs61440245
Chromosome Location chr3:51732155-51732156
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:51706400-51733400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr3:51706400-51741000 Weak transcription H9 Cell Line embryonic stem cell
3 chr3:51706600-51739600 Weak transcription Small Intestine intestine
4 chr3:51707800-51740400 Strong transcription Fetal Intestine Small intestine
5 chr3:51708800-51738800 Strong transcription Fetal Intestine Large intestine
6 chr3:51716200-51737000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr3:51716400-51741200 Weak transcription Fetal Kidney kidney
8 chr3:51716800-51738800 Strong transcription Cortex derived primary cultured neurospheres brain
9 chr3:51717400-51739800 Strong transcription Liver Liver
10 chr3:51719600-51741200 Weak transcription NHDF-Ad bronchial
11 chr3:51719800-51732400 Weak transcription Hela-S3 cervix
12 chr3:51720000-51733200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr3:51720200-51733000 Weak transcription Fetal Lung lung
14 chr3:51720600-51739800 Strong transcription Rectal Mucosa Donor 29 rectum
15 chr3:51720600-51740000 Strong transcription Sigmoid Colon Sigmoid Colon
16 chr3:51721000-51735600 Weak transcription K562 blood
17 chr3:51721000-51738200 Weak transcription A549 lung
18 chr3:51721000-51741000 Weak transcription HUVEC blood vessel
19 chr3:51721400-51734200 Genic enhancers Primary T cells fromperipheralblood blood
20 chr3:51721400-51738800 Strong transcription Colonic Mucosa Colon
21 chr3:51721400-51739400 Strong transcription Thymus Thymus
22 chr3:51721400-51739800 Strong transcription Duodenum Mucosa Duodenum
23 chr3:51721400-51740000 Strong transcription Placenta Placenta
24 chr3:51721400-51740200 Strong transcription Esophagus oesophagus
25 chr3:51721400-51740400 Strong transcription Dnd41 blood
26 chr3:51721400-51740600 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr3:51721400-51740800 Strong transcription Primary monocytes fromperipheralblood blood
28 chr3:51721600-51739400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr3:51721600-51740400 Strong transcription Fetal Stomach stomach
30 chr3:51721600-51740800 Weak transcription HSMM muscle
31 chr3:51721800-51740200 Strong transcription Stomach Smooth Muscle stomach
32 chr3:51722000-51733200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr3:51722000-51733200 Weak transcription HSMMtube muscle
34 chr3:51722000-51733600 Weak transcription NH-A brain
35 chr3:51722200-51736600 Weak transcription HMEC breast
36 chr3:51722200-51739200 Strong transcription Fetal Muscle Leg muscle
37 chr3:51722400-51739000 Strong transcription Fetal Muscle Trunk muscle
38 chr3:51722400-51740200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr3:51722600-51740000 Strong transcription Primary B cells from peripheral blood blood
40 chr3:51722600-51741200 Weak transcription Stomach Mucosa stomach
41 chr3:51722800-51732200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr3:51723200-51738600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr3:51723800-51738200 Strong transcription Fetal Thymus thymus
44 chr3:51723800-51739400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr3:51724000-51732600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr3:51724000-51733200 Weak transcription Muscle Satellite Cultured Cells --
47 chr3:51724000-51733600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr3:51724000-51739000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr3:51724000-51740200 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr3:51724000-51740400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015