The 2.0 version of rSNPBase

Variant report

Variant rs13433729
Chromosome Location chr3:51597188-51597189
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:51574000-51600600 Weak transcription Gastric stomach
2 chr3:51574000-51615400 Weak transcription H9 Cell Line embryonic stem cell
3 chr3:51574000-51624800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr3:51574200-51616400 Weak transcription Placenta Amnion Placenta Amnion
5 chr3:51574400-51613800 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr3:51574600-51600800 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr3:51574600-51601800 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr3:51574600-51624600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr3:51574800-51597600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr3:51574800-51624800 Weak transcription NH-A brain
11 chr3:51575000-51597400 Weak transcription Small Intestine intestine
12 chr3:51575200-51615600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr3:51576400-51597800 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr3:51576400-51602000 Weak transcription Brain Hippocampus Middle brain
15 chr3:51577200-51597600 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr3:51578600-51607000 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr3:51578800-51597400 Weak transcription Primary hematopoietic stem cells blood
18 chr3:51578800-51600200 Weak transcription A549 lung
19 chr3:51578800-51624400 Weak transcription Esophagus oesophagus
20 chr3:51579000-51602000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr3:51579200-51602400 Weak transcription HMEC breast
22 chr3:51580000-51602600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr3:51584200-51600200 Weak transcription Brain Inferior Temporal Lobe brain
24 chr3:51584200-51602200 Weak transcription Pancreas Pancrea
25 chr3:51584200-51602200 Weak transcription Spleen Spleen
26 chr3:51584200-51614200 Weak transcription Aorta Aorta
27 chr3:51584800-51600200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr3:51584800-51602200 Weak transcription Brain Cingulate Gyrus brain
29 chr3:51585000-51615600 Weak transcription NHEK skin
30 chr3:51585200-51624400 Weak transcription Brain Germinal Matrix brain
31 chr3:51585400-51602000 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr3:51585800-51612400 Weak transcription Fetal Thymus thymus
33 chr3:51585800-51625000 Weak transcription Colonic Mucosa Colon
34 chr3:51586200-51600000 Weak transcription Stomach Mucosa stomach
35 chr3:51586400-51601800 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr3:51587800-51607000 Weak transcription Primary T cells fromperipheralblood blood
37 chr3:51587800-51624400 Weak transcription Hela-S3 cervix
38 chr3:51588000-51612600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr3:51588000-51640000 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr3:51588200-51597400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr3:51588200-51600600 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr3:51588200-51612600 Weak transcription Lung lung
43 chr3:51588400-51599000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr3:51589000-51612400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr3:51589200-51612400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr3:51590000-51611800 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr3:51590800-51607000 Weak transcription GM12878-XiMat blood
48 chr3:51591000-51606800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr3:51591200-51601600 Weak transcription Primary monocytes fromperipheralblood blood
50 chr3:51591200-51612600 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015