The 2.0 version of rSNPBase

Variant report

Variant rs9812008
Chromosome Location chr3:51683078-51683079
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:51660800-51683200 Strong transcription Primary B cells from peripheral blood blood
2 chr3:51661000-51684200 Strong transcription Primary monocytes fromperipheralblood blood
3 chr3:51661600-51683200 Strong transcription Primary T cells fromperipheralblood blood
4 chr3:51661600-51683200 Strong transcription Left Ventricle heart
5 chr3:51661800-51683200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr3:51664000-51683200 Strong transcription Rectal Mucosa Donor 31 rectum
7 chr3:51667400-51683200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr3:51668800-51683200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr3:51672000-51683400 Strong transcription Liver Liver
10 chr3:51677000-51683200 Strong transcription Adipose Nuclei Adipose
11 chr3:51677600-51683200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr3:51677600-51684200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr3:51678400-51683200 Strong transcription Brain Angular Gyrus brain
14 chr3:51679600-51683200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
15 chr3:51680000-51696000 Weak transcription A549 lung
16 chr3:51680400-51684200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr3:51680600-51683400 Strong transcription Fetal Adrenal Gland Adrenal Gland
18 chr3:51680600-51692600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr3:51680800-51691400 Weak transcription GM12878-XiMat blood
20 chr3:51680800-51702800 Weak transcription K562 blood
21 chr3:51681000-51684200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr3:51681000-51688000 Weak transcription HSMMtube muscle
23 chr3:51681000-51689000 Weak transcription Hela-S3 cervix
24 chr3:51681000-51689600 Weak transcription HepG2 liver
25 chr3:51681000-51689600 Weak transcription NH-A brain
26 chr3:51681000-51689600 Weak transcription NHLF lung
27 chr3:51681000-51689800 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr3:51681000-51693400 Weak transcription Fetal Brain Male brain
29 chr3:51681000-51697000 Weak transcription Stomach Mucosa stomach
30 chr3:51681200-51689000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr3:51681200-51689400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:51681200-51693800 Weak transcription NHDF-Ad bronchial
33 chr3:51681400-51683200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr3:51681400-51687800 Weak transcription Primary T cells from cord blood blood
35 chr3:51681400-51688600 Weak transcription HMEC breast
36 chr3:51681400-51689400 Weak transcription HSMM muscle
37 chr3:51681600-51703200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr3:51681800-51689200 Weak transcription Colon Smooth Muscle Colon
39 chr3:51682000-51691400 Weak transcription NHEK skin
40 chr3:51682200-51683200 Strong transcription Fetal Brain Female brain
41 chr3:51682200-51683200 Strong transcription Fetal Muscle Trunk muscle
42 chr3:51682200-51683600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr3:51682200-51684400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr3:51682200-51691400 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr3:51682200-51691400 Weak transcription Pancreas Pancrea
46 chr3:51682200-51704400 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr3:51682400-51683400 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr3:51682400-51683400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr3:51682400-51683600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr3:51682400-51688000 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015