The 2.0 version of rSNPBase

Variant report

Variant rs59525691
Chromosome Location chr3:51620782-51620783
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:51574000-51624800 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr3:51574600-51624600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr3:51574800-51624800 Weak transcription NH-A brain
4 chr3:51578800-51624400 Weak transcription Esophagus oesophagus
5 chr3:51585200-51624400 Weak transcription Brain Germinal Matrix brain
6 chr3:51585800-51625000 Weak transcription Colonic Mucosa Colon
7 chr3:51587800-51624400 Weak transcription Hela-S3 cervix
8 chr3:51588000-51640000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr3:51594200-51622800 Weak transcription Muscle Satellite Cultured Cells --
10 chr3:51594200-51622800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr3:51597200-51622800 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr3:51598400-51622800 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr3:51600800-51654600 Weak transcription Stomach Mucosa stomach
14 chr3:51601000-51624600 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr3:51601200-51640000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr3:51602400-51622800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr3:51602800-51622800 Weak transcription Colon Smooth Muscle Colon
18 chr3:51602800-51624400 Weak transcription NHLF lung
19 chr3:51602800-51628200 Weak transcription Small Intestine intestine
20 chr3:51602800-51643800 Weak transcription Right Atrium heart
21 chr3:51603200-51622800 Weak transcription HSMM muscle
22 chr3:51603200-51624400 Weak transcription Right Ventricle heart
23 chr3:51607600-51622800 Weak transcription Adipose Nuclei Adipose
24 chr3:51607600-51624600 Weak transcription GM12878-XiMat blood
25 chr3:51607800-51624400 Weak transcription Primary monocytes fromperipheralblood blood
26 chr3:51607800-51624400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr3:51607800-51624400 Weak transcription Placenta Placenta
28 chr3:51612800-51622800 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr3:51612800-51624400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr3:51613000-51622600 Weak transcription Primary hematopoietic stem cells blood
31 chr3:51613000-51623000 Weak transcription Fetal Thymus thymus
32 chr3:51613200-51622800 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr3:51613200-51624200 Weak transcription Duodenum Mucosa Duodenum
34 chr3:51613200-51624400 Weak transcription Primary B cells from cord blood blood
35 chr3:51613200-51624400 Weak transcription Fetal Brain Female brain
36 chr3:51613200-51629400 Weak transcription Fetal Lung lung
37 chr3:51613200-51630800 Weak transcription Rectal Smooth Muscle rectum
38 chr3:51613200-51640000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr3:51613400-51622800 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr3:51613400-51624400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr3:51613400-51624400 Weak transcription Ovary ovary
42 chr3:51613400-51624400 Weak transcription Spleen Spleen
43 chr3:51613400-51643600 Weak transcription Pancreas Pancrea
44 chr3:51614000-51622800 Weak transcription Dnd41 blood
45 chr3:51614200-51622600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr3:51614400-51622800 Weak transcription Liver Liver
47 chr3:51614400-51624200 Weak transcription Thymus Thymus
48 chr3:51614400-51624400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr3:51614400-51626600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr3:51614600-51622800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015