The 2.0 version of rSNPBase

Variant report

Variant rs57041737
Chromosome Location chr13:52950624-52950625
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52934000-52951800 Weak transcription Fetal Intestine Small intestine
2 chr13:52946000-52951800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr13:52946000-52951800 Weak transcription Adipose Nuclei Adipose
4 chr13:52946000-52951800 Weak transcription Fetal Muscle Trunk muscle
5 chr13:52946000-52951800 Weak transcription Left Ventricle heart
6 chr13:52946000-52951800 Weak transcription Lung lung
7 chr13:52946000-52951800 Weak transcription Pancreas Pancrea
8 chr13:52946000-52951800 Weak transcription Right Ventricle heart
9 chr13:52946000-52952000 Weak transcription Aorta Aorta
10 chr13:52946000-52952000 Weak transcription Ovary ovary
11 chr13:52946000-52952800 Weak transcription Gastric stomach
12 chr13:52946000-52969600 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr13:52946200-52951800 Weak transcription Esophagus oesophagus
14 chr13:52946200-52951800 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr13:52946200-52952000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr13:52946200-52952600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr13:52946200-52979200 Weak transcription A549 lung
18 chr13:52946800-52951800 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr13:52946800-52951800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr13:52946800-52951800 Weak transcription Fetal Muscle Leg muscle
21 chr13:52947400-52951800 Weak transcription NHLF lung
22 chr13:52947600-52951800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr13:52947800-52968000 Weak transcription NHDF-Ad bronchial
24 chr13:52948000-52951800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr13:52948000-52952000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr13:52948000-52952000 Weak transcription NHEK skin
27 chr13:52948600-52950800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr13:52949000-52955800 Weak transcription Brain Angular Gyrus brain
29 chr13:52949200-52951800 Weak transcription Brain Germinal Matrix brain
30 chr13:52949400-52951800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr13:52949400-52951800 Weak transcription Muscle Satellite Cultured Cells --
32 chr13:52949400-52952000 Weak transcription HMEC breast
33 chr13:52949400-52952000 Weak transcription HUVEC blood vessel
34 chr13:52949600-52951400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr13:52949600-52951600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr13:52949600-52951800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr13:52949600-52952800 Weak transcription Liver Liver
38 chr13:52949800-52951800 Weak transcription Spleen Spleen
39 chr13:52949800-52979000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr13:52950000-52951800 Weak transcription Fetal Stomach stomach
41 chr13:52950200-52951800 Weak transcription Stomach Smooth Muscle stomach
42 chr13:52950200-52954200 Strong transcription HSMM muscle
43 chr13:52950400-52952000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr13:52950400-52952000 Weak transcription Fetal Intestine Large intestine
45 chr13:52950400-52952600 Weak transcription Brain Inferior Temporal Lobe brain
46 chr13:52950600-52952200 Weak transcription Fetal Brain Female brain
47 chr13:52950600-52952600 Strong transcription Osteobl bone
48 chr13:52950600-52953600 Strong transcription HSMMtube muscle

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Last update: Aug 31, 2015