The 2.0 version of rSNPBase

Variant report

Variant rs73486119
Chromosome Location chr13:52955499-52955500
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52946000-52969600 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr13:52946200-52979200 Weak transcription A549 lung
3 chr13:52947800-52968000 Weak transcription NHDF-Ad bronchial
4 chr13:52949000-52955800 Weak transcription Brain Angular Gyrus brain
5 chr13:52949800-52979000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr13:52951200-52961400 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr13:52951400-52955800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr13:52951800-52955800 Strong transcription Cortex derived primary cultured neurospheres brain
9 chr13:52952000-52964400 Weak transcription Brain Hippocampus Middle brain
10 chr13:52952600-52958400 Weak transcription Osteobl bone
11 chr13:52952600-52963400 Weak transcription Fetal Intestine Large intestine
12 chr13:52952600-52969200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr13:52952800-52958400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr13:52952800-52959200 Weak transcription Left Ventricle heart
15 chr13:52952800-52960200 Weak transcription Aorta Aorta
16 chr13:52952800-52967000 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr13:52952800-52968000 Weak transcription Muscle Satellite Cultured Cells --
18 chr13:52952800-52969000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr13:52952800-52969200 Weak transcription Fetal Brain Female brain
20 chr13:52952800-52969200 Weak transcription Spleen Spleen
21 chr13:52952800-52969200 Weak transcription NHEK skin
22 chr13:52952800-52969600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr13:52952800-52969600 Weak transcription NHLF lung
24 chr13:52952800-52971400 Weak transcription Right Ventricle heart
25 chr13:52953000-52956000 Weak transcription HUVEC blood vessel
26 chr13:52953000-52956400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr13:52953000-52957200 Weak transcription Fetal Stomach stomach
28 chr13:52953000-52957200 Weak transcription HMEC breast
29 chr13:52953000-52957400 Weak transcription Adipose Nuclei Adipose
30 chr13:52953000-52957600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr13:52953000-52961200 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr13:52953000-52961400 Weak transcription Fetal Intestine Small intestine
33 chr13:52953000-52964400 Weak transcription Brain Inferior Temporal Lobe brain
34 chr13:52953000-52968000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr13:52953000-52970000 Weak transcription Ovary ovary
36 chr13:52953200-52956600 Weak transcription Fetal Muscle Leg muscle
37 chr13:52953600-52957600 Weak transcription HSMMtube muscle
38 chr13:52954000-52956600 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr13:52954200-52955600 Enhancers Lung lung
40 chr13:52954200-52957400 Weak transcription HSMM muscle
41 chr13:52954400-52956600 Weak transcription Fetal Muscle Trunk muscle
42 chr13:52954400-52957400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr13:52955400-52957000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015