Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10961203	0.82[EUR][1000 genomes]
rs1360561	0.87[EUR][1000 genomes]
rs1443848	0.81[EUR][1000 genomes]
rs1443849	0.84[EUR][1000 genomes]
rs2165951	0.83[EUR][1000 genomes]
rs489504	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs504564	0.89[EUR][1000 genomes]
rs510076	0.89[EUR][1000 genomes]
rs524126	0.88[EUR][1000 genomes]
rs537601	0.89[EUR][1000 genomes]
rs611629	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs616906	0.92[CEU][hapmap];0.86[TSI][hapmap];0.87[EUR][1000 genomes]
rs626778	0.85[EUR][1000 genomes]
rs628475	0.89[EUR][1000 genomes]
rs629819	0.89[EUR][1000 genomes]
rs630700	0.89[EUR][1000 genomes]
rs630740	0.89[EUR][1000 genomes]
rs631061	0.88[EUR][1000 genomes]
rs631554	0.89[EUR][1000 genomes]
rs688784	0.82[EUR][1000 genomes]
rs7020018	0.93[ASN][1000 genomes]
rs7039168	0.85[EUR][1000 genomes]
rs7868006	0.93[ASN][1000 genomes]
rs789585	0.89[EUR][1000 genomes]
rs789586	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023684	chr9:13529680-13744602	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv540067	chr9:13529680-13744602	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv892587	chr9:13601074-13732363	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv1843958	chr9:13631992-13706651	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv892588	chr9:13667639-13715063	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	nsv1018933	chr9:13669862-13756710	Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13665800-13675800	Weak transcription	Left Ventricle	heart
2	chr9:13673200-13674600	Weak transcription	HMEC	breast
3	chr9:13673600-13674600	Enhancers	Fetal Heart	heart

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