Variant report

Variant	rs57265515
Chromosome Location	chr6:139686209-139686210
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:139685789..139687830-chr6:140256929..140258563,2	K562	blood:
2	chr6:139136853..139138112-chr6:139685310..139686588,4	K562	blood:
3	chr6:139684982..139687210-chr6:140465647..140468612,2	K562	blood:
4	chr6:138909078..138910499-chr6:139685191..139686369,4	K562	blood:
5	chr6:139445781..139446656-chr6:139685553..139686789,5	MCF-7	breast:
6	chr6:139445719..139446238-chr6:139685247..139686220,3	K562	blood:
7	chr6:139539973..139540947-chr6:139685227..139686217,4	MCF-7	breast:

rs_ID	r²[population]
rs12333148	1.00[EUR][1000 genomes]
rs17068665	1.00[EUR][1000 genomes]
rs17068686	1.00[EUR][1000 genomes]
rs17068688	1.00[EUR][1000 genomes]
rs56656982	1.00[EUR][1000 genomes]
rs60832886	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551320	1.00[EUR][1000 genomes]
rs73775522	1.00[EUR][1000 genomes]
rs73775523	1.00[EUR][1000 genomes]
rs73775525	1.00[EUR][1000 genomes]
rs7744629	1.00[EUR][1000 genomes]
rs9484277	1.00[EUR][1000 genomes]
rs9484278	1.00[EUR][1000 genomes]
rs9495436	1.00[EUR][1000 genomes]
rs9495438	1.00[EUR][1000 genomes]

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:139675600-139689400	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr6:139679200-139688800	Weak transcription	Right Atrium	heart
3	chr6:139683000-139688800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr6:139683000-139691000	Weak transcription	Thymus	Thymus
5	chr6:139683200-139688800	Weak transcription	Fetal Thymus	thymus
6	chr6:139683200-139689000	Weak transcription	Primary hematopoietic stem cells	blood
7	chr6:139684600-139688600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr6:139685800-139686400	Enhancers	Fetal Heart	heart
9	chr6:139685800-139688600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr6:139685800-139688600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr6:139685800-139688800	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr6:139685800-139689000	Weak transcription	Primary T cells fromperipheralblood	blood
13	chr6:139685800-139689000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
14	chr6:139685800-139689000	Weak transcription	Primary T helper cells fromperipheralblood	blood
15	chr6:139685800-139689000	Weak transcription	Dnd41	blood
16	chr6:139685800-139689200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
17	chr6:139685800-139690400	Weak transcription	Primary monocytes fromperipheralblood	blood
18	chr6:139685800-139690400	Weak transcription	Primary neutrophils fromperipheralblood	blood
19	chr6:139685800-139690800	Weak transcription	Monocytes-CD14+_RO01746	blood
20	chr6:139685800-139691000	Weak transcription	Primary B cells from peripheral blood	blood
21	chr6:139685800-139691400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
22	chr6:139686000-139687000	Weak transcription	HUES48 Cell Line	embryonic stem cell
23	chr6:139686000-139688600	Weak transcription	Primary T helper cells PMA-I stimulated	--
24	chr6:139686000-139688600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
25	chr6:139686000-139690200	Weak transcription	Muscle Satellite Cultured Cells	--
26	chr6:139686000-139690400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
27	chr6:139686000-139690800	Weak transcription	Primary T cells from cord blood	blood
28	chr6:139686200-139687000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
29	chr6:139686200-139687200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
30	chr6:139686200-139688600	Enhancers	iPS-18 Cell Line	embryonic stem cell
31	chr6:139686200-139688800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
32	chr6:139686200-139690000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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