Variant report
| Variant | rs57285842 |
|---|---|
| Chromosome Location | chr5:126387997-126387998 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:126367600-126391800 | Weak transcription | GM12878-XiMat | blood |
| 2 | chr5:126372200-126391600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 3 | chr5:126374600-126408400 | Weak transcription | Psoas Muscle | Psoas |
| 4 | chr5:126376000-126391800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 5 | chr5:126377200-126391600 | Weak transcription | Fetal Stomach | stomach |
| 6 | chr5:126377200-126391800 | Weak transcription | Fetal Muscle Leg | muscle |
| 7 | chr5:126377200-126395200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 8 | chr5:126377200-126400000 | Weak transcription | Gastric | stomach |
| 9 | chr5:126377200-126401400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 10 | chr5:126377200-126409000 | Weak transcription | Spleen | Spleen |
| 11 | chr5:126377400-126391600 | Weak transcription | Pancreas | Pancrea |
| 12 | chr5:126377400-126395800 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr5:126377400-126403800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 14 | chr5:126377400-126404600 | Weak transcription | Left Ventricle | heart |
| 15 | chr5:126377400-126408400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 16 | chr5:126377600-126391600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 17 | chr5:126378000-126391800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 18 | chr5:126378000-126408000 | Weak transcription | Fetal Intestine Small | intestine |
| 19 | chr5:126378000-126408400 | Weak transcription | Right Ventricle | heart |
| 20 | chr5:126378200-126391200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 21 | chr5:126378200-126408200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 22 | chr5:126378400-126408000 | Weak transcription | HMEC | breast |
| 23 | chr5:126378800-126392600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 24 | chr5:126379200-126404800 | Weak transcription | Brain Germinal Matrix | brain |
| 25 | chr5:126379400-126388400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 26 | chr5:126379400-126391000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 27 | chr5:126379400-126404600 | Weak transcription | Fetal Heart | heart |
| 28 | chr5:126380200-126391600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 29 | chr5:126380200-126391800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 30 | chr5:126380200-126391800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 31 | chr5:126380400-126408000 | Weak transcription | HepG2 | liver |
| 32 | chr5:126380600-126391600 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 33 | chr5:126380800-126391800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 34 | chr5:126381000-126397800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 35 | chr5:126381400-126391800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 36 | chr5:126381400-126408400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 37 | chr5:126381600-126396600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 38 | chr5:126382400-126391600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 39 | chr5:126382400-126408600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 40 | chr5:126382800-126391000 | Weak transcription | Fetal Intestine Large | intestine |
| 41 | chr5:126382800-126391800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 42 | chr5:126383000-126391600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 43 | chr5:126385600-126388200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 44 | chr5:126386000-126406400 | Weak transcription | Adipose Nuclei | Adipose |
| 45 | chr5:126386400-126395400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 46 | chr5:126387000-126388400 | Strong transcription | Primary B cells from cord blood | blood |
| 47 | chr5:126387000-126393000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 48 | chr5:126387200-126388000 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 49 | chr5:126387200-126388800 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 50 | chr5:126387400-126388000 | Strong transcription | Primary T cells from cord blood | blood |
