Variant report

Variant rs6882025
Chromosome Location chr5:126377134-126377135
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:126367600-126382000 Weak transcription Primary B cells from cord blood blood
2 chr5:126367600-126391800 Weak transcription GM12878-XiMat blood
3 chr5:126368000-126387200 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr5:126370200-126379000 Weak transcription Primary T cells from cord blood blood
5 chr5:126372200-126391600 Weak transcription Primary hematopoietic stem cells blood
6 chr5:126374400-126385000 Weak transcription Small Intestine intestine
7 chr5:126374600-126408400 Weak transcription Psoas Muscle Psoas
8 chr5:126375600-126377400 Enhancers H9 Cell Line embryonic stem cell
9 chr5:126375800-126377400 Enhancers Fetal Intestine Large intestine
10 chr5:126375800-126377600 Enhancers H1 Cell Line embryonic stem cell
11 chr5:126375800-126378000 Enhancers Fetal Intestine Small intestine
12 chr5:126375800-126378400 Enhancers HMEC breast
13 chr5:126376000-126377400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr5:126376000-126377400 Enhancers Left Ventricle heart
15 chr5:126376000-126378000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr5:126376000-126391800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr5:126376200-126377400 Enhancers Cortex derived primary cultured neurospheres brain
18 chr5:126376200-126377400 Flanking Active TSS Duodenum Mucosa Duodenum
19 chr5:126376200-126377800 Enhancers Fetal Heart heart
20 chr5:126376200-126378000 Enhancers Lung lung
21 chr5:126376200-126378400 Enhancers Muscle Satellite Cultured Cells --
22 chr5:126376200-126378800 Enhancers iPS-18 Cell Line embryonic stem cell
23 chr5:126376400-126377200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
24 chr5:126376400-126377200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
25 chr5:126376400-126377200 Enhancers Skeletal Muscle Female skeletal muscle
26 chr5:126376400-126378000 Enhancers Brain Anterior Caudate brain
27 chr5:126376400-126378200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr5:126376400-126378200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr5:126376400-126378200 Enhancers K562 blood
30 chr5:126376400-126378800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr5:126376600-126377200 Enhancers Fetal Muscle Leg muscle
32 chr5:126376600-126377200 Enhancers Spleen Spleen
33 chr5:126376600-126377200 Enhancers Hela-S3 cervix
34 chr5:126376600-126377400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr5:126376600-126377400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
36 chr5:126376600-126377400 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr5:126376600-126377400 Enhancers Pancreas Pancrea
38 chr5:126376600-126377400 Enhancers Skeletal Muscle Male skeletal muscle
39 chr5:126376600-126377400 Flanking Active TSS HUVEC blood vessel
40 chr5:126376600-126377600 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr5:126376600-126378000 Enhancers Right Ventricle heart
42 chr5:126376600-126378200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
43 chr5:126376600-126378200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
44 chr5:126376600-126378200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr5:126376600-126378200 Enhancers Aorta Aorta
46 chr5:126376600-126378200 Enhancers Right Atrium heart
47 chr5:126376600-126378200 Enhancers HSMM muscle
48 chr5:126376600-126378200 Enhancers NH-A brain
49 chr5:126376800-126377200 Enhancers iPS-20b Cell Line embryonic stem cell
50 chr5:126376800-126377200 Enhancers Esophagus oesophagus

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