Variant report
| Variant | rs57906418 |
|---|---|
| Chromosome Location | chr5:126246286-126246287 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:126201800-126253400 | Weak transcription | A549 | lung |
| 2 | chr5:126214600-126250400 | Weak transcription | Pancreas | Pancrea |
| 3 | chr5:126214800-126255200 | Weak transcription | Psoas Muscle | Psoas |
| 4 | chr5:126229600-126253600 | Weak transcription | Brain Anterior Caudate | brain |
| 5 | chr5:126231200-126254000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 6 | chr5:126233800-126256000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 7 | chr5:126237000-126254000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 8 | chr5:126237400-126247600 | Weak transcription | Fetal Heart | heart |
| 9 | chr5:126237800-126256000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 10 | chr5:126238200-126256000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 11 | chr5:126238800-126247400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 12 | chr5:126238800-126253800 | Weak transcription | HSMMtube | muscle |
| 13 | chr5:126239000-126250200 | Weak transcription | Ovary | ovary |
| 14 | chr5:126239200-126247600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 15 | chr5:126239200-126247600 | Weak transcription | Left Ventricle | heart |
| 16 | chr5:126239200-126250600 | Weak transcription | Right Ventricle | heart |
| 17 | chr5:126239200-126250600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 18 | chr5:126241200-126250600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 19 | chr5:126243000-126250400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 20 | chr5:126243800-126248000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 21 | chr5:126244000-126253600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 22 | chr5:126244400-126257000 | Weak transcription | Fetal Thymus | thymus |
| 23 | chr5:126244400-126261200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 24 | chr5:126245000-126246400 | ZNF genes & repeats | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 25 | chr5:126245000-126247000 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
| 26 | chr5:126245200-126249000 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 27 | chr5:126245400-126246400 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
| 28 | chr5:126245400-126246400 | Enhancers | HUVEC | blood vessel |
| 29 | chr5:126245400-126247200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 30 | chr5:126245400-126247600 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
| 31 | chr5:126245400-126250400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 32 | chr5:126245400-126253000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 33 | chr5:126245400-126253600 | Strong transcription | Primary B cells from cord blood | blood |
| 34 | chr5:126245400-126256000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 35 | chr5:126245600-126246400 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
| 36 | chr5:126245600-126246400 | Strong transcription | Primary T cells from cord blood | blood |
| 37 | chr5:126245600-126247200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 38 | chr5:126245600-126247400 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
| 39 | chr5:126245600-126248000 | ZNF genes & repeats | Primary hematopoietic stem cells | blood |
| 40 | chr5:126245600-126250400 | Weak transcription | Aorta | Aorta |
| 41 | chr5:126245600-126253600 | Strong transcription | HSMM | muscle |
| 42 | chr5:126245800-126246400 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
| 43 | chr5:126245800-126247400 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 44 | chr5:126245800-126256600 | Weak transcription | Thymus | Thymus |
| 45 | chr5:126246200-126247000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 46 | chr5:126246200-126247200 | Weak transcription | K562 | blood |
| 47 | chr5:126246200-126248000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 48 | chr5:126246200-126249200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 49 | chr5:126246200-126250400 | Weak transcription | Fetal Muscle Leg | muscle |
| 50 | chr5:126246200-126250400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
