The 2.0 version of rSNPBase

Variant report

Variant rs12651864
Chromosome Location chr5:126381598-126381599
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:126367600-126382000 Weak transcription Primary B cells from cord blood blood
2 chr5:126367600-126391800 Weak transcription GM12878-XiMat blood
3 chr5:126368000-126387200 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr5:126372200-126391600 Weak transcription Primary hematopoietic stem cells blood
5 chr5:126374400-126385000 Weak transcription Small Intestine intestine
6 chr5:126374600-126408400 Weak transcription Psoas Muscle Psoas
7 chr5:126376000-126391800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr5:126377200-126387200 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr5:126377200-126391600 Weak transcription Fetal Stomach stomach
10 chr5:126377200-126391800 Weak transcription Fetal Muscle Leg muscle
11 chr5:126377200-126395200 Weak transcription Rectal Smooth Muscle rectum
12 chr5:126377200-126400000 Weak transcription Gastric stomach
13 chr5:126377200-126401400 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr5:126377200-126409000 Weak transcription Spleen Spleen
15 chr5:126377400-126382000 Weak transcription Duodenum Mucosa Duodenum
16 chr5:126377400-126382000 Weak transcription Fetal Intestine Large intestine
17 chr5:126377400-126382400 Weak transcription Primary B cells from peripheral blood blood
18 chr5:126377400-126391600 Weak transcription Pancreas Pancrea
19 chr5:126377400-126395800 Weak transcription Colonic Mucosa Colon
20 chr5:126377400-126403800 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr5:126377400-126404600 Weak transcription Left Ventricle heart
22 chr5:126377400-126408400 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr5:126377600-126391600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr5:126378000-126391800 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr5:126378000-126408000 Weak transcription Fetal Intestine Small intestine
26 chr5:126378000-126408400 Weak transcription Right Ventricle heart
27 chr5:126378200-126382200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr5:126378200-126382200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr5:126378200-126382400 Weak transcription Aorta Aorta
30 chr5:126378200-126383000 Weak transcription Stomach Mucosa stomach
31 chr5:126378200-126384000 Weak transcription K562 blood
32 chr5:126378200-126387600 Weak transcription HSMM muscle
33 chr5:126378200-126391200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr5:126378200-126408200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr5:126378400-126386200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr5:126378400-126408000 Weak transcription HMEC breast
37 chr5:126378800-126392600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr5:126379000-126382800 Strong transcription Primary T cells from cord blood blood
39 chr5:126379200-126404800 Weak transcription Brain Germinal Matrix brain
40 chr5:126379400-126388400 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr5:126379400-126391000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr5:126379400-126404600 Weak transcription Fetal Heart heart
43 chr5:126380200-126391600 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr5:126380200-126391800 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr5:126380200-126391800 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr5:126380400-126382600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr5:126380400-126408000 Weak transcription HepG2 liver
48 chr5:126380600-126387800 Weak transcription Thymus Thymus
49 chr5:126380600-126391600 Weak transcription Primary T cells fromperipheralblood blood
50 chr5:126380800-126391800 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015