The 2.0 version of rSNPBase

Variant report

Variant rs57319601
Chromosome Location chr14:65415743-65415744
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:65382400-65417400 Weak transcription Placenta Amnion Placenta Amnion
2 chr14:65382400-65420000 Weak transcription Fetal Brain Male brain
3 chr14:65383000-65419400 Weak transcription K562 blood
4 chr14:65393400-65422200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr14:65396000-65417800 Weak transcription H9 Cell Line embryonic stem cell
6 chr14:65399000-65428000 Weak transcription NHLF lung
7 chr14:65400000-65417000 Weak transcription Colon Smooth Muscle Colon
8 chr14:65401400-65432200 Weak transcription HUVEC blood vessel
9 chr14:65401600-65435000 Weak transcription NH-A brain
10 chr14:65404400-65416600 Weak transcription Psoas Muscle Psoas
11 chr14:65404400-65419600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr14:65404600-65418200 Weak transcription Brain Angular Gyrus brain
13 chr14:65404600-65419600 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr14:65405000-65417200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr14:65405800-65416200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr14:65406600-65438000 Weak transcription Fetal Kidney kidney
17 chr14:65407800-65417400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr14:65409200-65416000 Strong transcription Primary T regulatory cells fromperipheralblood blood
19 chr14:65409600-65428400 Strong transcription Fetal Stomach stomach
20 chr14:65410000-65417000 Weak transcription Rectal Smooth Muscle rectum
21 chr14:65410000-65418200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr14:65410200-65425200 Weak transcription HMEC breast
23 chr14:65410400-65418200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr14:65410400-65419200 Strong transcription Lung lung
25 chr14:65410400-65425400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr14:65410600-65421600 Weak transcription Pancreas Pancrea
27 chr14:65411000-65417600 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr14:65411000-65423200 Weak transcription NHEK skin
29 chr14:65411000-65437200 Weak transcription Fetal Lung lung
30 chr14:65411200-65425400 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr14:65411200-65427600 Weak transcription A549 lung
32 chr14:65411200-65435000 Weak transcription Primary hematopoietic stem cells blood
33 chr14:65411400-65418600 Weak transcription GM12878-XiMat blood
34 chr14:65411400-65421400 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr14:65411400-65425200 Weak transcription Stomach Mucosa stomach
36 chr14:65411400-65435000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr14:65411400-65438000 Weak transcription Small Intestine intestine
38 chr14:65411600-65419400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr14:65412200-65416000 Strong transcription Primary monocytes fromperipheralblood blood
40 chr14:65412200-65419400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr14:65412200-65420000 Strong transcription Placenta Placenta
42 chr14:65412400-65419200 Strong transcription Brain Germinal Matrix brain
43 chr14:65412400-65438000 Weak transcription Brain Substantia Nigra brain
44 chr14:65412600-65418800 Strong transcription Dnd41 blood
45 chr14:65412800-65416000 Strong transcription Brain Cingulate Gyrus brain
46 chr14:65412800-65418000 Strong transcription Fetal Muscle Trunk muscle
47 chr14:65413000-65416800 Genic enhancers Skeletal Muscle Male skeletal muscle
48 chr14:65413000-65426200 Weak transcription Primary B cells from peripheral blood blood
49 chr14:65413200-65418400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr14:65413200-65419600 Strong transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015