The 2.0 version of rSNPBase

Variant report

Variant rs574155
Chromosome Location chr12:120227810-120227811
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:120188000-120228800 Weak transcription HSMMtube muscle
2 chr12:120190000-120244800 Weak transcription Primary B cells from cord blood blood
3 chr12:120191200-120235600 Weak transcription Colonic Mucosa Colon
4 chr12:120199200-120241000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr12:120209400-120293600 Weak transcription Primary T cells from cord blood blood
6 chr12:120210000-120228800 Weak transcription Brain Cingulate Gyrus brain
7 chr12:120210000-120235400 Weak transcription Brain Angular Gyrus brain
8 chr12:120210000-120239200 Weak transcription Fetal Brain Female brain
9 chr12:120210800-120231400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr12:120214600-120241000 Weak transcription Fetal Intestine Large intestine
11 chr12:120217800-120228600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr12:120218800-120241000 Weak transcription Fetal Kidney kidney
13 chr12:120218800-120241200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr12:120219000-120241400 Weak transcription NHEK skin
15 chr12:120220000-120240600 Weak transcription Fetal Lung lung
16 chr12:120221600-120241000 Weak transcription NH-A brain
17 chr12:120221600-120241400 Weak transcription HMEC breast
18 chr12:120221800-120241400 Weak transcription HSMM muscle
19 chr12:120222000-120229200 Weak transcription NHDF-Ad bronchial
20 chr12:120222000-120231200 Weak transcription K562 blood
21 chr12:120222000-120241200 Weak transcription Duodenum Mucosa Duodenum
22 chr12:120222400-120230400 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr12:120222400-120231600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr12:120222800-120229000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr12:120222800-120231200 Weak transcription NHLF lung
26 chr12:120222800-120241000 Weak transcription Fetal Intestine Small intestine
27 chr12:120223000-120232200 Weak transcription Fetal Muscle Trunk muscle
28 chr12:120223000-120234200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr12:120223000-120239800 Weak transcription Brain Germinal Matrix brain
30 chr12:120223000-120255800 Weak transcription HepG2 liver
31 chr12:120223000-120314400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr12:120223200-120231200 Weak transcription H9 Cell Line embryonic stem cell
33 chr12:120223200-120231200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr12:120223200-120231200 Weak transcription Fetal Thymus thymus
35 chr12:120223200-120231200 Weak transcription GM12878-XiMat blood
36 chr12:120223200-120239800 Weak transcription Osteobl bone
37 chr12:120223200-120242000 Weak transcription HUVEC blood vessel
38 chr12:120223400-120231200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr12:120223400-120231600 Weak transcription Fetal Muscle Leg muscle
40 chr12:120223400-120234400 Weak transcription Primary hematopoietic stem cells blood
41 chr12:120223400-120234400 Weak transcription Brain Inferior Temporal Lobe brain
42 chr12:120223600-120231400 Weak transcription Primary monocytes fromperipheralblood blood
43 chr12:120223800-120231000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr12:120224000-120231200 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr12:120224400-120231000 Weak transcription H1 Cell Line embryonic stem cell
46 chr12:120224400-120241200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr12:120224600-120228600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr12:120224600-120228800 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr12:120224600-120229000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr12:120224600-120229200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015