The 2.0 version of rSNPBase

Variant report

Variant rs57476920
Chromosome Location chr4:174170046-174170047
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:174123600-174174200 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr4:174142200-174173400 Weak transcription Lung lung
3 chr4:174148000-174173400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr4:174150200-174173400 Weak transcription Small Intestine intestine
5 chr4:174151400-174171000 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr4:174152600-174173400 Weak transcription Left Ventricle heart
7 chr4:174153600-174171000 Weak transcription Primary monocytes fromperipheralblood blood
8 chr4:174157400-174171000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr4:174158200-174172600 Weak transcription K562 blood
10 chr4:174158600-174173000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr4:174158800-174172200 Weak transcription Brain Substantia Nigra brain
12 chr4:174159200-174172600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr4:174159200-174172600 Weak transcription Brain Hippocampus Middle brain
14 chr4:174159200-174175200 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr4:174159200-174204600 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr4:174159600-174189000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr4:174160800-174172400 Weak transcription Brain Anterior Caudate brain
18 chr4:174160800-174172600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr4:174163800-174184600 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr4:174164000-174173600 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr4:174164000-174177000 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr4:174164000-174185600 Weak transcription Primary T cells fromperipheralblood blood
23 chr4:174164000-174185800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr4:174164000-174186000 Weak transcription Aorta Aorta
25 chr4:174164200-174171000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr4:174164200-174185400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr4:174164800-174178800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr4:174165000-174171400 Weak transcription NHLF lung
29 chr4:174165000-174173200 Weak transcription Hela-S3 cervix
30 chr4:174165400-174172800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr4:174165600-174173200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr4:174165600-174173200 Weak transcription Esophagus oesophagus
33 chr4:174165600-174173400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr4:174165600-174176200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr4:174165600-174182200 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr4:174168200-174173400 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr4:174168200-174179000 Genic enhancers Dnd41 blood
38 chr4:174168400-174172600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr4:174168400-174177400 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr4:174168600-174171600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr4:174168600-174172000 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr4:174168600-174172400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr4:174168600-174172800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr4:174168600-174174400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr4:174168600-174185800 Weak transcription Brain Germinal Matrix brain
46 chr4:174168800-174170200 Weak transcription Fetal Lung lung
47 chr4:174168800-174171800 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr4:174168800-174173200 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr4:174168800-174173200 Genic enhancers Thymus Thymus
50 chr4:174169000-174171800 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015