The 2.0 version of rSNPBase

Variant report

Variant rs57572680
Chromosome Location chr4:174198569-174198570
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:174159200-174204600 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr4:174171400-174202600 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr4:174173600-174202200 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr4:174186400-174198600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr4:174186400-174208600 Weak transcription Esophagus oesophagus
6 chr4:174186600-174206800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr4:174186600-174207000 Weak transcription Ovary ovary
8 chr4:174186600-174207000 Weak transcription Small Intestine intestine
9 chr4:174186600-174209800 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr4:174186800-174203600 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr4:174187400-174202400 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr4:174191800-174204600 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr4:174191800-174205000 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr4:174192200-174198800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr4:174192200-174205000 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr4:174192800-174199600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr4:174193200-174200400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr4:174194600-174205600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr4:174195200-174206200 Weak transcription Fetal Lung lung
20 chr4:174195200-174207600 Weak transcription Stomach Mucosa stomach
21 chr4:174195400-174202600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr4:174196400-174198800 Genic enhancers Fetal Thymus thymus
23 chr4:174196600-174201800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr4:174196600-174202000 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr4:174196600-174202200 Weak transcription Primary monocytes fromperipheralblood blood
26 chr4:174196600-174202200 Weak transcription Duodenum Mucosa Duodenum
27 chr4:174196600-174202200 Weak transcription Fetal Stomach stomach
28 chr4:174196600-174202400 Weak transcription Aorta Aorta
29 chr4:174196600-174203200 Weak transcription Fetal Intestine Large intestine
30 chr4:174196600-174204400 Weak transcription Lung lung
31 chr4:174196800-174201600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr4:174196800-174201800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr4:174196800-174202000 Weak transcription Dnd41 blood
34 chr4:174196800-174202200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr4:174196800-174202200 Weak transcription Primary T cells from cord blood blood
36 chr4:174196800-174202200 Weak transcription GM12878-XiMat blood
37 chr4:174196800-174202400 Weak transcription Fetal Muscle Leg muscle
38 chr4:174196800-174202600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr4:174196800-174203800 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr4:174196800-174210000 Weak transcription Gastric stomach
41 chr4:174197000-174201800 Weak transcription Primary hematopoietic stem cells blood
42 chr4:174197200-174200000 Weak transcription Primary B cells from cord blood blood
43 chr4:174197200-174201800 Weak transcription K562 blood
44 chr4:174197200-174202200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr4:174197200-174202200 Weak transcription Fetal Intestine Small intestine
46 chr4:174197800-174199200 Enhancers Thymus Thymus

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Last update: Aug 31, 2015