The 2.0 version of rSNPBase

Variant report

Variant rs57520226
Chromosome Location chr5:94937366-94937367
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:94900400-94942400 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr5:94904600-94939400 Weak transcription Primary B cells from peripheral blood blood
3 chr5:94905000-94939200 Weak transcription Aorta Aorta
4 chr5:94905000-94940600 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr5:94912800-94943400 Weak transcription Fetal Intestine Small intestine
6 chr5:94915000-94939000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr5:94917400-94940800 Weak transcription Fetal Brain Male brain
8 chr5:94926200-94937400 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr5:94926400-94941800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr5:94926800-94938600 Weak transcription K562 blood
11 chr5:94926800-94942000 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr5:94927000-94940800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr5:94927000-94948800 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr5:94927000-94954200 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr5:94927000-94954200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr5:94927400-94938400 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr5:94927600-94937600 Weak transcription Left Ventricle heart
18 chr5:94927600-94951800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr5:94927800-94941200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr5:94927800-94952200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr5:94928200-94938400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr5:94928200-94952200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr5:94928400-94938200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr5:94928400-94948600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr5:94928600-94941800 Weak transcription HMEC breast
26 chr5:94933600-94948600 Weak transcription Pancreas Pancrea
27 chr5:94935000-94940000 Weak transcription Brain Hippocampus Middle brain
28 chr5:94935200-94941000 Weak transcription Fetal Stomach stomach
29 chr5:94935200-94942000 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr5:94935800-94937800 Strong transcription Primary B cells from cord blood blood
31 chr5:94935800-94938200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr5:94935800-94939200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr5:94936000-94938600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr5:94936200-94937400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr5:94936200-94938000 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr5:94936200-94938200 Strong transcription Primary T cells from cord blood blood
37 chr5:94936200-94938600 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr5:94936400-94937600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr5:94936400-94937600 Strong transcription Liver Liver
40 chr5:94936400-94939600 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr5:94936600-94937400 Strong transcription Fetal Lung lung
42 chr5:94936600-94937800 Strong transcription Primary hematopoietic stem cells blood
43 chr5:94936600-94937800 Strong transcription Fetal Adrenal Gland Adrenal Gland
44 chr5:94936600-94937800 Strong transcription Fetal Intestine Large intestine
45 chr5:94936600-94937800 Strong transcription Ovary ovary
46 chr5:94936600-94938000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr5:94936600-94938000 Strong transcription Fetal Muscle Trunk muscle
48 chr5:94936600-94938000 Strong transcription Fetal Thymus thymus
49 chr5:94936800-94937600 Strong transcription Dnd41 blood
50 chr5:94936800-94937800 Strong transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015