Variant report

Variant	rs57696433
Chromosome Location	chr1:151703474-151703475
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11204878	0.80[EUR][1000 genomes]
rs12402668	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12407636	0.89[EUR][1000 genomes]
rs2011802	0.89[EUR][1000 genomes]
rs2275920	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2275921	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2298294	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4466658	0.83[AMR][1000 genomes]
rs59527020	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61501378	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:151699200-151703800	Enhancers	Fetal Brain Male	brain
2	chr1:151700800-151704000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr1:151700800-151709800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr1:151701600-151707400	Weak transcription	Brain Anterior Caudate	brain
5	chr1:151701800-151703600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr1:151701800-151703800	Weak transcription	Stomach Smooth Muscle	stomach
7	chr1:151702000-151707400	Weak transcription	Brain Angular Gyrus	brain
8	chr1:151702200-151709800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr1:151702600-151709600	Weak transcription	Right Atrium	heart
10	chr1:151702800-151707200	Weak transcription	Liver	Liver
11	chr1:151702800-151707400	Weak transcription	Pancreas	Pancrea
12	chr1:151702800-151707600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr1:151702800-151712200	Weak transcription	Stomach Mucosa	stomach
14	chr1:151703000-151704000	Weak transcription	HepG2	liver
15	chr1:151703000-151707400	Weak transcription	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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