Variant report
| Variant | rs57898410 |
|---|---|
| Chromosome Location | chr14:55715949-55715950 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:4 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr14:55710760..55712909-chr14:55714004..55716438,2 | K562 | blood: | |
| 2 | chr14:55568573..55570268-chr14:55714995..55717036,2 | K562 | blood: | |
| 3 | chr14:55709259..55712260-chr14:55714004..55717778,3 | K562 | blood: | |
| 4 | chr14:55714468..55716489-chr14:55876982..55879150,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000126775 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:21)
| rs_ID | r2[population] |
|---|---|
| rs17128352 | 1.00[AFR][1000 genomes] |
| rs17128378 | 0.88[AFR][1000 genomes] |
| rs17128379 | 0.88[AFR][1000 genomes] |
| rs17128399 | 0.88[AFR][1000 genomes] |
| rs17128402 | 0.88[AFR][1000 genomes] |
| rs17128405 | 0.88[AFR][1000 genomes] |
| rs57733734 | 0.88[AFR][1000 genomes] |
| rs58729410 | 0.88[AFR][1000 genomes] |
| rs73263908 | 0.88[AFR][1000 genomes] |
| rs73263920 | 0.88[AFR][1000 genomes] |
| rs73263926 | 0.88[AFR][1000 genomes] |
| rs73263940 | 0.88[AFR][1000 genomes] |
| rs73263944 | 0.88[AFR][1000 genomes] |
| rs73273656 | 1.00[AFR][1000 genomes] |
| rs73273697 | 0.94[AFR][1000 genomes] |
| rs73281229 | 1.00[AFR][1000 genomes] |
| rs73281236 | 0.88[AFR][1000 genomes] |
| rs73281243 | 0.88[AFR][1000 genomes] |
| rs73281258 | 0.88[AFR][1000 genomes] |
| rs73281262 | 0.88[AFR][1000 genomes] |
| rs73281268 | 0.88[AFR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
