Variant report

Variant	rs73281258
Chromosome Location	chr14:55739574-55739575
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZNF263	chr14:55738546-55739575	HEK293-T-REx	kidney:	n/a	chr14:55739359-55739368
2	POLR2A	chr14:55737553-55740318	PBDE	blood:	n/a	n/a
3	STAT3	chr14:55739539-55739713	MCF10A-Er-Src	breast:	n/a	n/a
4	ZNF384	chr14:55738744-55740057	K562	blood:	n/a	n/a

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:55736427..55740242-chr14:55801434..55807681,7	MCF-7	breast:
2	chr14:55516892..55519791-chr14:55737278..55740152,4	K562	blood:
3	chr14:55657821..55660879-chr14:55735073..55739609,4	K562	blood:
4	chr14:55739383..55741164-chr14:55767168..55768699,2	MCF-7	breast:
5	chr14:55736795..55740558-chr14:55765144..55770564,6	K562	blood:
6	chr14:55737940..55739664-chr14:55764646..55766801,2	MCF-7	breast:
7	chr14:55738930..55742893-chr14:55754578..55758061,4	K562	blood:
8	chr14:55738930..55742893-chr14:55754578..55757898,4	K562	blood:
9	chr14:55664630..55666911-chr14:55737863..55740088,2	K562	blood:
10	chr14:55736665..55740457-chr14:55875135..55883763,10	K562	blood:

No data

Variant related genes	Relation type
ENSG00000258413	TF binding region
ENSG00000258469	Chromatin interaction
ENSG00000258455	Chromatin interaction
ENSG00000239199	Chromatin interaction
ENSG00000258050	Chromatin interaction
ENSG00000168175	Chromatin interaction
ENSG00000126775	Chromatin interaction
ENSG00000126787	Chromatin interaction

rs_ID	r²[population]
rs17128252	0.87[AFR][1000 genomes]
rs17128352	0.88[AFR][1000 genomes]
rs17128378	1.00[AFR][1000 genomes]
rs17128379	1.00[AFR][1000 genomes]
rs17128399	1.00[AFR][1000 genomes]
rs17128402	1.00[AFR][1000 genomes]
rs17128405	1.00[AFR][1000 genomes]
rs57733734	1.00[AFR][1000 genomes]
rs57898410	0.88[AFR][1000 genomes]
rs58709772	0.87[AFR][1000 genomes]
rs58729410	1.00[AFR][1000 genomes]
rs73263908	1.00[AFR][1000 genomes]
rs73263920	1.00[AFR][1000 genomes]
rs73263926	1.00[AFR][1000 genomes]
rs73263940	1.00[AFR][1000 genomes]
rs73263944	1.00[AFR][1000 genomes]
rs73271737	0.87[AFR][1000 genomes]
rs73271745	0.87[AFR][1000 genomes]
rs73273639	0.87[AFR][1000 genomes]
rs73273656	0.88[AFR][1000 genomes]
rs73273697	0.83[AFR][1000 genomes]
rs73281229	0.88[AFR][1000 genomes]
rs73281236	1.00[AFR][1000 genomes]
rs73281243	1.00[AFR][1000 genomes]
rs73281262	1.00[AFR][1000 genomes]
rs73281268	1.00[AFR][1000 genomes]
rs73281273	0.86[AFR][1000 genomes]

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55737400-55739800	Active TSS	NHLF	lung
2	chr14:55737400-55741000	Active TSS	Brain Inferior Temporal Lobe	brain
3	chr14:55737600-55739600	Active TSS	HUES64 Cell Line	embryonic stem cell
4	chr14:55737600-55739600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr14:55737600-55739600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
6	chr14:55737600-55739600	Active TSS	Esophagus	oesophagus
7	chr14:55737600-55739600	Active TSS	Fetal Thymus	thymus
8	chr14:55737600-55739600	Active TSS	Lung	lung
9	chr14:55737600-55739600	Active TSS	Hela-S3	cervix
10	chr14:55737600-55739800	Active TSS	HUES48 Cell Line	embryonic stem cell
11	chr14:55737600-55740000	Active TSS	Colonic Mucosa	Colon
12	chr14:55737600-55740600	Active TSS	Brain Cingulate Gyrus	brain
13	chr14:55737600-55740800	Active TSS	Brain Anterior Caudate	brain
14	chr14:55737600-55741000	Active TSS	Psoas Muscle	Psoas
15	chr14:55737600-55741000	Active TSS	Right Ventricle	heart
16	chr14:55737600-55741200	Active TSS	Brain Angular Gyrus	brain
17	chr14:55737600-55741400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr14:55737800-55739600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr14:55737800-55739600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr14:55737800-55739600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr14:55737800-55739800	Active TSS	Thymus	Thymus
22	chr14:55737800-55739800	Active TSS	A549	lung
23	chr14:55737800-55740000	Active TSS	ES-I3 Cell Line	embryonic stem cell
24	chr14:55737800-55740000	Active TSS	HSMMtube	muscle
25	chr14:55737800-55740000	Active TSS	K562	blood
26	chr14:55737800-55740200	Active TSS	HUES6 Cell Line	embryonic stem cell
27	chr14:55737800-55740200	Active TSS	Fetal Muscle Leg	muscle
28	chr14:55738000-55739600	Active TSS	Skeletal Muscle Male	skeletal muscle
29	chr14:55738000-55739800	Active TSS	Primary T cells fromperipheralblood	blood
30	chr14:55738000-55740000	Active TSS	Ovary	ovary
31	chr14:55738000-55740000	Active TSS	Sigmoid Colon	Sigmoid Colon
32	chr14:55738000-55740400	Active TSS	Left Ventricle	heart
33	chr14:55738000-55740400	Active TSS	Skeletal Muscle Female	skeletal muscle
34	chr14:55738000-55741200	Active TSS	Right Atrium	heart
35	chr14:55738600-55739600	Active TSS	Stomach Mucosa	stomach
36	chr14:55738600-55739800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr14:55738600-55740000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
38	chr14:55738600-55740200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr14:55738800-55739800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr14:55738800-55739800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr14:55738800-55740200	Flanking Active TSS	NHEK	skin
42	chr14:55738800-55740600	Flanking Active TSS	Dnd41	blood
43	chr14:55739000-55739600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
44	chr14:55739000-55739600	Flanking Active TSS	Liver	Liver
45	chr14:55739000-55739600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
46	chr14:55739000-55739800	Flanking Active TSS	Primary B cells from cord blood	blood
47	chr14:55739000-55739800	Flanking Active TSS	Primary T cells from cord blood	blood
48	chr14:55739000-55740000	Flanking Active TSS	Primary hematopoietic stem cells	blood
49	chr14:55739000-55740000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
50	chr14:55739000-55740000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--

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