Variant report

Variant	rs73281273
Chromosome Location	chr14:55744345-55744346
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:55736955..55739749-chr14:55742518..55745062,4	MCF-7	breast:
2	chr14:55742882..55744479-chr14:55746766..55748710,2	K562	blood:
3	chr14:55744215..55745744-chr14:55768392..55770363,2	K562	blood:
4	chr14:55737408..55740170-chr14:55742761..55744765,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000258413	Chromatin interaction
ENSG00000178974	Chromatin interaction

rs_ID	r²[population]
rs17128252	0.86[AFR][1000 genomes]
rs17128378	0.86[AFR][1000 genomes]
rs17128379	0.86[AFR][1000 genomes]
rs17128399	0.86[AFR][1000 genomes]
rs17128402	0.86[AFR][1000 genomes]
rs17128405	0.86[AFR][1000 genomes]
rs57733734	0.86[AFR][1000 genomes]
rs58709772	0.86[AFR][1000 genomes]
rs58729410	0.86[AFR][1000 genomes]
rs73263908	0.86[AFR][1000 genomes]
rs73263920	0.86[AFR][1000 genomes]
rs73263926	0.86[AFR][1000 genomes]
rs73263940	0.86[AFR][1000 genomes]
rs73263944	0.86[AFR][1000 genomes]
rs73271737	0.86[AFR][1000 genomes]
rs73271745	0.86[AFR][1000 genomes]
rs73273639	0.86[AFR][1000 genomes]
rs73281236	0.86[AFR][1000 genomes]
rs73281243	0.86[AFR][1000 genomes]
rs73281258	0.86[AFR][1000 genomes]
rs73281262	0.86[AFR][1000 genomes]
rs73281268	0.86[AFR][1000 genomes]

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55739000-55751400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr14:55739000-55755600	Weak transcription	Gastric	stomach
3	chr14:55739200-55745600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
4	chr14:55739200-55768400	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr14:55739600-55744400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
6	chr14:55739600-55744800	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr14:55739600-55744800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr14:55739600-55745400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr14:55739600-55745400	Weak transcription	Fetal Stomach	stomach
10	chr14:55740000-55745600	Enhancers	Primary T helper cells PMA-I stimulated	--
11	chr14:55740000-55746400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr14:55740000-55751400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr14:55740000-55751400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr14:55740000-55770600	Weak transcription	Colonic Mucosa	Colon
15	chr14:55740200-55744800	Enhancers	HepG2	liver
16	chr14:55740200-55746400	Weak transcription	HUES6 Cell Line	embryonic stem cell
17	chr14:55740200-55754200	Weak transcription	Hela-S3	cervix
18	chr14:55740600-55744600	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr14:55740600-55751400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr14:55740800-55744600	Weak transcription	Lung	lung
21	chr14:55740800-55750800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr14:55740800-55751400	Weak transcription	Placenta	Placenta
23	chr14:55740800-55752000	Weak transcription	Esophagus	oesophagus
24	chr14:55741000-55744600	Weak transcription	Psoas Muscle	Psoas
25	chr14:55741000-55744800	Enhancers	Dnd41	blood
26	chr14:55741000-55746600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr14:55741000-55764600	Weak transcription	Fetal Muscle Leg	muscle
28	chr14:55741000-55773200	Weak transcription	Fetal Muscle Trunk	muscle
29	chr14:55741200-55749000	Weak transcription	Right Atrium	heart
30	chr14:55741200-55754000	Weak transcription	Fetal Brain Male	brain
31	chr14:55741800-55744400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
32	chr14:55741800-55744800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr14:55741800-55745000	Enhancers	Fetal Heart	heart
34	chr14:55741800-55750800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr14:55741800-55752400	Weak transcription	A549	lung
36	chr14:55741800-55763800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr14:55741800-55763800	Weak transcription	NHEK	skin
38	chr14:55741800-55764600	Weak transcription	HMEC	breast
39	chr14:55742000-55744600	Weak transcription	Liver	Liver
40	chr14:55742000-55744600	Weak transcription	Rectal Smooth Muscle	rectum
41	chr14:55742000-55752200	Weak transcription	Fetal Lung	lung
42	chr14:55742000-55765400	Weak transcription	Muscle Satellite Cultured Cells	--
43	chr14:55742200-55744400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
44	chr14:55742200-55744600	Weak transcription	Adipose Nuclei	Adipose
45	chr14:55742200-55744600	Enhancers	Brain Anterior Caudate	brain
46	chr14:55742200-55744600	Weak transcription	HSMM	muscle
47	chr14:55742200-55744800	Weak transcription	Brain Substantia Nigra	brain
48	chr14:55742200-55749800	Weak transcription	Fetal Kidney	kidney
49	chr14:55742200-55751600	Weak transcription	Osteobl	bone
50	chr14:55742200-55754000	Weak transcription	Brain Inferior Temporal Lobe	brain

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