The 2.0 version of rSNPBase

Variant report

Variant rs17128405
Chromosome Location chr14:55792799-55792800
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55777000-55792800 Weak transcription Brain Angular Gyrus brain
2 chr14:55777000-55795000 Weak transcription NHDF-Ad bronchial
3 chr14:55777200-55799000 Weak transcription Colon Smooth Muscle Colon
4 chr14:55777400-55795000 Weak transcription Osteobl bone
5 chr14:55777400-55799200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr14:55779200-55793800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr14:55779200-55798800 Weak transcription K562 blood
8 chr14:55779200-55817600 Weak transcription Hela-S3 cervix
9 chr14:55779600-55795200 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr14:55779600-55796800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr14:55779600-55796800 Weak transcription Ovary ovary
12 chr14:55779600-55797200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr14:55779600-55799600 Weak transcription Rectal Smooth Muscle rectum
14 chr14:55779600-55801200 Weak transcription Esophagus oesophagus
15 chr14:55779800-55794400 Weak transcription HepG2 liver
16 chr14:55779800-55794800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr14:55779800-55795400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr14:55779800-55800800 Weak transcription Adipose Nuclei Adipose
19 chr14:55780000-55797200 Weak transcription Primary T cells fromperipheralblood blood
20 chr14:55780000-55797800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr14:55780200-55793600 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr14:55780200-55807800 Weak transcription Thymus Thymus
23 chr14:55780400-55793600 Weak transcription Primary monocytes fromperipheralblood blood
24 chr14:55780600-55795200 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr14:55780600-55796800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr14:55780600-55799000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr14:55780600-55800600 Weak transcription NHEK skin
28 chr14:55780600-55806200 Weak transcription HMEC breast
29 chr14:55780800-55799400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr14:55780800-55800800 Weak transcription Lung lung
31 chr14:55780800-55817200 Weak transcription Fetal Muscle Trunk muscle
32 chr14:55781400-55799600 Weak transcription NH-A brain
33 chr14:55782000-55817200 Weak transcription HSMM muscle
34 chr14:55782600-55795000 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr14:55782600-55796600 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr14:55783000-55798800 Weak transcription Liver Liver
37 chr14:55783200-55799400 Weak transcription Fetal Thymus thymus
38 chr14:55783400-55797400 Weak transcription Stomach Mucosa stomach
39 chr14:55783600-55797200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr14:55783600-55799000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr14:55783600-55799400 Weak transcription Pancreas Pancrea
42 chr14:55783600-55800800 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr14:55783800-55799400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr14:55784000-55799800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr14:55784200-55801200 Weak transcription Fetal Stomach stomach
46 chr14:55784600-55793800 Weak transcription Right Atrium heart
47 chr14:55784600-55795000 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr14:55784600-55799400 Weak transcription HSMMtube muscle
49 chr14:55784600-55800800 Weak transcription Gastric stomach
50 chr14:55784800-55793000 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015