The 2.0 version of rSNPBase

Variant report

Variant rs58085049
Chromosome Location chr9:72692339-72692340
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72676600-72694000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr9:72677600-72694000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr9:72684800-72694000 Weak transcription Adipose Nuclei Adipose
4 chr9:72685000-72694600 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr9:72685200-72695800 Weak transcription Aorta Aorta
6 chr9:72685200-72696000 Weak transcription Right Atrium heart
7 chr9:72687200-72694800 Strong transcription HSMMtube muscle
8 chr9:72688400-72694000 Enhancers Rectal Smooth Muscle rectum
9 chr9:72688600-72695200 Weak transcription HSMM muscle
10 chr9:72688600-72696400 Enhancers Ovary ovary
11 chr9:72688800-72694000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr9:72688800-72694400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr9:72689000-72692800 Enhancers Duodenum Smooth Muscle Duodenum
14 chr9:72689000-72695600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr9:72689200-72694600 Weak transcription Muscle Satellite Cultured Cells --
16 chr9:72689400-72696200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr9:72690200-72692800 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr9:72690200-72694000 Weak transcription Fetal Lung lung
19 chr9:72690200-72694200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr9:72690200-72695200 Enhancers Colon Smooth Muscle Colon
21 chr9:72690600-72695600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr9:72690600-72696200 Weak transcription Duodenum Mucosa Duodenum
23 chr9:72691000-72693800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr9:72691200-72693800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr9:72691400-72693400 Weak transcription Fetal Stomach stomach
26 chr9:72691600-72693800 Enhancers Stomach Smooth Muscle stomach
27 chr9:72692000-72692400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr9:72692000-72694400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr9:72692200-72692400 Enhancers Small Intestine intestine
30 chr9:72692200-72693800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015