The 2.0 version of rSNPBase

Variant report

Variant rs58305443
Chromosome Location chr1:213418443-213418444
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213326600-213422200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr1:213340600-213424600 Weak transcription Pancreas Pancrea
3 chr1:213370800-213427600 Weak transcription Rectal Smooth Muscle rectum
4 chr1:213373000-213423000 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr1:213378800-213421200 Weak transcription Fetal Kidney kidney
6 chr1:213381600-213425000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:213388000-213424600 Weak transcription Gastric stomach
8 chr1:213388200-213426200 Weak transcription Lung lung
9 chr1:213388200-213455400 Weak transcription Placenta Placenta
10 chr1:213391200-213439200 Weak transcription Primary B cells from cord blood blood
11 chr1:213394400-213420200 Weak transcription GM12878-XiMat blood
12 chr1:213398600-213427200 Weak transcription Colon Smooth Muscle Colon
13 chr1:213401200-213447400 Weak transcription Small Intestine intestine
14 chr1:213402800-213454800 Weak transcription Brain Substantia Nigra brain
15 chr1:213405400-213423000 Weak transcription A549 lung
16 chr1:213405600-213440000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:213405600-213454800 Weak transcription Brain Angular Gyrus brain
18 chr1:213405800-213423200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:213405800-213423800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:213405800-213436000 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr1:213405800-213457600 Weak transcription NHLF lung
22 chr1:213406000-213450000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:213406200-213418600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:213406200-213421200 Weak transcription Psoas Muscle Psoas
25 chr1:213406200-213422000 Weak transcription HSMM muscle
26 chr1:213406200-213445600 Weak transcription NHDF-Ad bronchial
27 chr1:213406200-213454800 Weak transcription Muscle Satellite Cultured Cells --
28 chr1:213409800-213424200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr1:213412600-213452400 Weak transcription Right Ventricle heart
30 chr1:213414600-213425400 Weak transcription NH-A brain
31 chr1:213414600-213438400 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:213414600-213440000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:213414800-213445400 Weak transcription Brain Inferior Temporal Lobe brain
34 chr1:213414800-213445600 Weak transcription Stomach Smooth Muscle stomach
35 chr1:213415000-213419400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr1:213415000-213421800 Weak transcription Primary hematopoietic stem cells blood
37 chr1:213415000-213440400 Weak transcription Ovary ovary
38 chr1:213415200-213422200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr1:213415200-213440200 Weak transcription Fetal Muscle Leg muscle
40 chr1:213415400-213423600 Weak transcription Dnd41 blood
41 chr1:213415400-213424600 Weak transcription Left Ventricle heart
42 chr1:213415400-213433400 Weak transcription K562 blood
43 chr1:213415400-213450200 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr1:213415600-213420000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:213415600-213447200 Weak transcription Duodenum Mucosa Duodenum
46 chr1:213415600-213451000 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr1:213415600-213453800 Weak transcription Brain Cingulate Gyrus brain
48 chr1:213415800-213421800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:213415800-213436400 Weak transcription Osteobl bone
50 chr1:213415800-213440000 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015