The 2.0 version of rSNPBase

Variant report

Variant rs60414722
Chromosome Location chr1:213454355-213454356
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213388200-213455400 Weak transcription Placenta Placenta
2 chr1:213402800-213454800 Weak transcription Brain Substantia Nigra brain
3 chr1:213405600-213454800 Weak transcription Brain Angular Gyrus brain
4 chr1:213405800-213457600 Weak transcription NHLF lung
5 chr1:213406200-213454800 Weak transcription Muscle Satellite Cultured Cells --
6 chr1:213433800-213454800 Weak transcription Brain Anterior Caudate brain
7 chr1:213434400-213454800 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:213434400-213454800 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:213435200-213456200 Weak transcription Esophagus oesophagus
10 chr1:213440000-213469800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:213440600-213454400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:213440600-213454800 Weak transcription Left Ventricle heart
13 chr1:213440800-213457600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:213440800-213465800 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:213441000-213454600 Weak transcription Fetal Muscle Trunk muscle
16 chr1:213443600-213457000 Weak transcription Lung lung
17 chr1:213444000-213454800 Weak transcription Fetal Brain Female brain
18 chr1:213444000-213455000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:213444200-213457600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:213445600-213454400 Weak transcription Brain Germinal Matrix brain
21 chr1:213447200-213454400 Enhancers HepG2 liver
22 chr1:213447400-213457600 Weak transcription NHDF-Ad bronchial
23 chr1:213447800-213454400 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:213447800-213454600 Weak transcription Brain Hippocampus Middle brain
25 chr1:213447800-213457000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:213447800-213457600 Weak transcription Osteobl bone
27 chr1:213448400-213454800 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:213448400-213457600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:213449400-213457600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr1:213449400-213458200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:213449600-213457600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:213450800-213454600 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:213451000-213454800 Weak transcription HSMM muscle
34 chr1:213452200-213454600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr1:213452800-213455800 Enhancers iPS-15b Cell Line embryonic stem cell
36 chr1:213453200-213455600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr1:213453200-213455800 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr1:213453400-213454400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:213453600-213454600 Weak transcription H1 Cell Line embryonic stem cell
40 chr1:213453600-213455600 Enhancers HSMMtube muscle
41 chr1:213453800-213454800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:213453800-213454800 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr1:213453800-213455800 Enhancers HUES48 Cell Line embryonic stem cell
44 chr1:213454000-213454400 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr1:213454000-213454400 Weak transcription Brain Cingulate Gyrus brain
46 chr1:213454200-213454600 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr1:213454200-213455600 Enhancers Psoas Muscle Psoas
48 chr1:213454200-213456200 Enhancers Fetal Muscle Leg muscle

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Last update: Aug 31, 2015