The 2.0 version of rSNPBase

Variant report

Variant rs7533253
Chromosome Location chr1:213298286-213298287
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213261600-213309200 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr1:213261600-213327400 Weak transcription Aorta Aorta
3 chr1:213269400-213308400 Weak transcription Ovary ovary
4 chr1:213269600-213311800 Weak transcription Primary B cells from cord blood blood
5 chr1:213271200-213309200 Weak transcription Adipose Nuclei Adipose
6 chr1:213271600-213310200 Weak transcription Fetal Muscle Trunk muscle
7 chr1:213281200-213301000 Weak transcription Fetal Lung lung
8 chr1:213281200-213309000 Weak transcription Primary monocytes fromperipheralblood blood
9 chr1:213281200-213309400 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr1:213281200-213320400 Weak transcription Primary T cells from cord blood blood
11 chr1:213281400-213303400 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr1:213281400-213311000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:213284200-213317200 Weak transcription Left Ventricle heart
14 chr1:213284600-213309400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr1:213284600-213349800 Weak transcription Primary T cells fromperipheralblood blood
16 chr1:213285400-213317200 Weak transcription Fetal Kidney kidney
17 chr1:213285600-213303000 Weak transcription GM12878-XiMat blood
18 chr1:213292400-213317400 Weak transcription Primary hematopoietic stem cells blood
19 chr1:213294000-213310000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:213294200-213300600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr1:213294200-213321400 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr1:213296000-213298400 Enhancers Stomach Mucosa stomach
23 chr1:213296400-213305400 Weak transcription Brain Substantia Nigra brain
24 chr1:213296800-213300400 Weak transcription Brain Hippocampus Middle brain
25 chr1:213297000-213299200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:213297200-213305400 Weak transcription Brain Anterior Caudate brain
27 chr1:213297400-213305400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:213297400-213308400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:213297400-213320400 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr1:213297600-213298600 Flanking Active TSS K562 blood
31 chr1:213297600-213300000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:213297600-213300200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:213297600-213300400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:213297600-213300400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:213297600-213300400 Weak transcription NHDF-Ad bronchial
36 chr1:213297600-213300400 Weak transcription NHLF lung
37 chr1:213297600-213305200 Weak transcription HepG2 liver
38 chr1:213297600-213309600 Weak transcription Fetal Intestine Large intestine
39 chr1:213297600-213313600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:213297800-213298800 Weak transcription HUVEC blood vessel
41 chr1:213297800-213299200 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:213297800-213300200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:213297800-213300200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:213297800-213300200 Weak transcription Osteobl bone
45 chr1:213297800-213300400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:213297800-213300400 Weak transcription Hela-S3 cervix
47 chr1:213297800-213300400 Weak transcription HMEC breast
48 chr1:213297800-213300400 Weak transcription NHEK skin
49 chr1:213297800-213300600 Weak transcription HSMM muscle
50 chr1:213297800-213305400 Weak transcription NH-A brain

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Last update: Aug 31, 2015