Variant report
| Variant | rs17020046 |
|---|---|
| Chromosome Location | chr1:213127101-213127102 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:213125000-213127200 | Transcr. at gene 5' and 3' | HUES48 Cell Line | embryonic stem cell |
| 2 | chr1:213125000-213127400 | Transcr. at gene 5' and 3' | HUES64 Cell Line | embryonic stem cell |
| 3 | chr1:213125200-213127200 | Transcr. at gene 5' and 3' | ES-I3 Cell Line | embryonic stem cell |
| 4 | chr1:213125200-213127400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr1:213125200-213129400 | Weak transcription | Thymus | Thymus |
| 6 | chr1:213125200-213132800 | Weak transcription | Lung | lung |
| 7 | chr1:213125200-213134200 | Weak transcription | Right Atrium | heart |
| 8 | chr1:213125400-213127200 | Transcr. at gene 5' and 3' | iPS-20b Cell Line | embryonic stem cell |
| 9 | chr1:213125600-213131000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 10 | chr1:213125600-213131200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 11 | chr1:213125600-213132600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr1:213125600-213141000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 13 | chr1:213125800-213141000 | Weak transcription | A549 | lung |
| 14 | chr1:213125800-213145800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 15 | chr1:213126000-213127200 | Genic enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 16 | chr1:213126000-213127200 | Enhancers | Fetal Kidney | kidney |
| 17 | chr1:213126000-213134000 | Weak transcription | Fetal Intestine Small | intestine |
| 18 | chr1:213126200-213127200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 19 | chr1:213126200-213131200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 20 | chr1:213126400-213127400 | Strong transcription | Brain Germinal Matrix | brain |
| 21 | chr1:213126400-213127800 | Flanking Active TSS | GM12878-XiMat | blood |
| 22 | chr1:213126400-213128000 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 23 | chr1:213126400-213129800 | Genic enhancers | Fetal Muscle Trunk | muscle |
| 24 | chr1:213126400-213152400 | Strong transcription | Fetal Stomach | stomach |
| 25 | chr1:213126600-213127600 | Genic enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 26 | chr1:213126600-213127800 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 27 | chr1:213126600-213128600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 28 | chr1:213126600-213129800 | Genic enhancers | Fetal Muscle Leg | muscle |
| 29 | chr1:213126600-213140600 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 30 | chr1:213126800-213127200 | Strong transcription | HSMM | muscle |
| 31 | chr1:213126800-213127400 | Enhancers | Fetal Thymus | thymus |
| 32 | chr1:213126800-213127600 | Strong transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 33 | chr1:213126800-213130400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 34 | chr1:213126800-213154400 | Strong transcription | Fetal Brain Female | brain |
| 35 | chr1:213127000-213127600 | Genic enhancers | iPS-15b Cell Line | embryonic stem cell |
| 36 | chr1:213127000-213128400 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 37 | chr1:213127000-213129000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 38 | chr1:213127000-213129800 | Genic enhancers | HUES6 Cell Line | embryonic stem cell |
| 39 | chr1:213127000-213130000 | Genic enhancers | HSMMtube | muscle |
| 40 | chr1:213127000-213136400 | Weak transcription | Fetal Brain Male | brain |
| 41 | chr1:213127000-213153200 | Strong transcription | Fetal Lung | lung |
