The 2.0 version of rSNPBase

Variant report

Variant rs2359324
Chromosome Location chr1:213066914-213066915
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
2 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
3 chr1:213034400-213068000 Weak transcription Colon Smooth Muscle Colon
4 chr1:213034600-213067800 Weak transcription NHLF lung
5 chr1:213034600-213070600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:213035800-213073000 Weak transcription Small Intestine intestine
7 chr1:213036000-213070800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:213037600-213073200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr1:213038400-213072000 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr1:213039600-213073000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:213040400-213073000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:213043200-213073400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr1:213045000-213070800 Weak transcription Pancreas Pancrea
14 chr1:213047000-213073600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:213049000-213073000 Weak transcription HSMMtube muscle
16 chr1:213049800-213072400 Weak transcription Fetal Brain Male brain
17 chr1:213049800-213073200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:213049800-213073200 Weak transcription Spleen Spleen
19 chr1:213052200-213073000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:213052800-213073400 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:213053400-213073800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:213053600-213073000 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr1:213053800-213073200 Strong transcription HUES48 Cell Line embryonic stem cell
24 chr1:213053800-213073200 Strong transcription HUES6 Cell Line embryonic stem cell
25 chr1:213054000-213071000 Strong transcription iPS-20b Cell Line embryonic stem cell
26 chr1:213054200-213071400 Strong transcription iPS-18 Cell Line embryonic stem cell
27 chr1:213054400-213073200 Strong transcription HUES64 Cell Line embryonic stem cell
28 chr1:213055000-213073600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:213055200-213073200 Strong transcription H1 Cell Line embryonic stem cell
30 chr1:213056000-213071200 Strong transcription Primary B cells from peripheral blood blood
31 chr1:213056000-213072200 Strong transcription ES-I3 Cell Line embryonic stem cell
32 chr1:213056200-213072000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:213056200-213074200 Strong transcription Duodenum Mucosa Duodenum
34 chr1:213056400-213068000 Strong transcription Fetal Muscle Trunk muscle
35 chr1:213056400-213070000 Strong transcription K562 blood
36 chr1:213056400-213073400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:213056600-213073600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr1:213056800-213073000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:213057000-213068400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr1:213057000-213072200 Strong transcription Fetal Muscle Leg muscle
41 chr1:213057000-213073400 Strong transcription Fetal Intestine Large intestine
42 chr1:213057600-213067800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:213057600-213075000 Weak transcription Right Ventricle heart
44 chr1:213058000-213073400 Strong transcription A549 lung
45 chr1:213058600-213073000 Weak transcription Brain Germinal Matrix brain
46 chr1:213059400-213073600 Strong transcription Primary T cells from cord blood blood
47 chr1:213060400-213072800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr1:213061800-213068000 Strong transcription Brain Hippocampus Middle brain
49 chr1:213061800-213071600 Strong transcription Left Ventricle heart
50 chr1:213062000-213067400 Strong transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015