The 2.0 version of rSNPBase

Variant report

Variant rs1692180
Chromosome Location chr1:213089865-213089866
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213079600-213090000 Weak transcription Right Atrium heart
2 chr1:213086800-213094400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:213088000-213090200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:213088000-213090400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
5 chr1:213088000-213090400 Enhancers Fetal Brain Male brain
6 chr1:213088000-213090600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:213088000-213090600 Enhancers Cortex derived primary cultured neurospheres brain
8 chr1:213088000-213090800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
9 chr1:213088200-213090200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:213088200-213090600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:213088200-213090600 Enhancers Fetal Muscle Trunk muscle
12 chr1:213088400-213090400 Enhancers Fetal Lung lung
13 chr1:213088400-213090600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:213088400-213090600 Enhancers K562 blood
15 chr1:213088400-213090800 Enhancers GM12878-XiMat blood
16 chr1:213088600-213090000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
17 chr1:213088600-213090000 Enhancers Fetal Intestine Large intestine
18 chr1:213088600-213090400 Enhancers Brain Angular Gyrus brain
19 chr1:213088600-213090400 Enhancers Placenta Placenta
20 chr1:213088800-213090000 Enhancers H1 Cell Line embryonic stem cell
21 chr1:213088800-213090000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:213088800-213090000 Enhancers HUES64 Cell Line embryonic stem cell
23 chr1:213088800-213090000 Weak transcription Fetal Kidney kidney
24 chr1:213088800-213090200 Weak transcription Brain Anterior Caudate brain
25 chr1:213088800-213090800 Enhancers HUES48 Cell Line embryonic stem cell
26 chr1:213089000-213090000 Weak transcription Brain Germinal Matrix brain
27 chr1:213089000-213090400 Enhancers Right Ventricle heart
28 chr1:213089000-213090600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:213089000-213090600 Genic enhancers iPS-20b Cell Line embryonic stem cell
30 chr1:213089000-213090600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:213089200-213090000 Weak transcription H9 Cell Line embryonic stem cell
32 chr1:213089200-213090200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:213089200-213090200 Weak transcription Esophagus oesophagus
34 chr1:213089200-213090200 Weak transcription Pancreas Pancrea
35 chr1:213089200-213090400 Enhancers Spleen Spleen
36 chr1:213089400-213090000 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr1:213089400-213090600 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr1:213089400-213091600 Active TSS ES-I3 Cell Line embryonic stem cell
39 chr1:213089600-213090000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:213089600-213090000 Enhancers Primary monocytes fromperipheralblood blood
41 chr1:213089600-213090000 Enhancers Fetal Muscle Leg muscle
42 chr1:213089600-213090000 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
43 chr1:213089600-213090000 Enhancers A549 lung
44 chr1:213089600-213090200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:213089600-213090200 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr1:213089600-213090400 Enhancers Primary hematopoietic stem cells blood
47 chr1:213089600-213090400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:213089600-213090400 Bivalent Enhancer Fetal Stomach stomach
49 chr1:213089600-213090400 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
50 chr1:213089600-213090600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015