The 2.0 version of rSNPBase

Variant report

Variant rs1284800
Chromosome Location chr1:212970375-212970376
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212965800-212971000 Weak transcription Small Intestine intestine
2 chr1:212965800-212972000 Weak transcription Gastric stomach
3 chr1:212965800-212992600 Weak transcription Lung lung
4 chr1:212966000-212972000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:212966000-212974800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:212966000-212981200 Weak transcription Esophagus oesophagus
7 chr1:212966000-212983000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:212966000-212997400 Weak transcription Aorta Aorta
9 chr1:212966200-212971000 Weak transcription HSMMtube muscle
10 chr1:212966200-212971800 Weak transcription Fetal Kidney kidney
11 chr1:212966200-212972000 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:212966200-212973800 Weak transcription Colonic Mucosa Colon
13 chr1:212966200-212975600 Weak transcription HMEC breast
14 chr1:212966200-212979800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr1:212966400-212970400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr1:212966400-212970400 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr1:212966400-212970400 Weak transcription NH-A brain
18 chr1:212966400-212972000 Weak transcription Fetal Brain Female brain
19 chr1:212966400-212972000 Weak transcription Fetal Muscle Leg muscle
20 chr1:212966400-212972000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr1:212966400-212972000 Weak transcription Thymus Thymus
22 chr1:212966400-212977400 Weak transcription Hela-S3 cervix
23 chr1:212966400-212984000 Weak transcription Rectal Smooth Muscle rectum
24 chr1:212966400-212985600 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr1:212966400-212988200 Weak transcription Fetal Heart heart
26 chr1:212966400-212989600 Weak transcription Fetal Brain Male brain
27 chr1:212966400-212990200 Weak transcription Right Ventricle heart
28 chr1:212966600-212970400 Weak transcription Stomach Smooth Muscle stomach
29 chr1:212966600-212970600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr1:212966800-212977600 Weak transcription Brain Germinal Matrix brain
31 chr1:212966800-212989600 Weak transcription Psoas Muscle Psoas
32 chr1:212967000-212970400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr1:212967000-212970800 Weak transcription Muscle Satellite Cultured Cells --
34 chr1:212967000-212972000 Weak transcription NHEK skin
35 chr1:212967000-212979000 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr1:212967000-212984400 Weak transcription Spleen Spleen
37 chr1:212967200-212970600 Weak transcription A549 lung
38 chr1:212967200-212975400 Weak transcription HSMM muscle
39 chr1:212967200-212984000 Weak transcription NHDF-Ad bronchial
40 chr1:212967200-212988400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr1:212967200-212989000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:212967200-212989600 Weak transcription NHLF lung
43 chr1:212968000-212980000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:212968000-212987400 Weak transcription Fetal Intestine Large intestine
45 chr1:212968200-212971600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:212968200-212972000 Weak transcription Fetal Intestine Small intestine
47 chr1:212968400-212970400 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr1:212968400-212970400 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr1:212968400-212970400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr1:212968400-212970600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015