The 2.0 version of rSNPBase

Variant report

Variant rs6667161
Chromosome Location chr1:213049363-213049364
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
2 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
3 chr1:213032800-213056800 Weak transcription Fetal Thymus thymus
4 chr1:213032800-213057800 Weak transcription Placenta Placenta
5 chr1:213032800-213061800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:213032800-213062000 Weak transcription Psoas Muscle Psoas
7 chr1:213033600-213062000 Weak transcription Thymus Thymus
8 chr1:213034400-213058000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:213034400-213068000 Weak transcription Colon Smooth Muscle Colon
10 chr1:213034600-213049400 Weak transcription Gastric stomach
11 chr1:213034600-213056200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:213034600-213057000 Weak transcription Brain Substantia Nigra brain
13 chr1:213034600-213057000 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:213034600-213057200 Weak transcription Right Ventricle heart
15 chr1:213034600-213061800 Weak transcription Fetal Heart heart
16 chr1:213034600-213067800 Weak transcription NHLF lung
17 chr1:213034600-213070600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:213035800-213049400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:213035800-213073000 Weak transcription Small Intestine intestine
20 chr1:213036000-213070800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:213036200-213062000 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:213036400-213062000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr1:213036600-213051400 Strong transcription iPS-18 Cell Line embryonic stem cell
24 chr1:213036600-213053200 Strong transcription iPS-20b Cell Line embryonic stem cell
25 chr1:213037600-213073200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:213037800-213052000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:213037800-213052400 Strong transcription HUES48 Cell Line embryonic stem cell
28 chr1:213037800-213052600 Strong transcription HUES6 Cell Line embryonic stem cell
29 chr1:213038200-213052400 Strong transcription HUES64 Cell Line embryonic stem cell
30 chr1:213038400-213072000 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr1:213039400-213054000 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr1:213039600-213073000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:213040400-213073000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:213040800-213055200 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr1:213041400-213055000 Strong transcription Fetal Intestine Small intestine
36 chr1:213041800-213050400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:213043200-213062000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:213043200-213073400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr1:213044000-213053800 Strong transcription Fetal Intestine Large intestine
40 chr1:213044200-213049800 Strong transcription Aorta Aorta
41 chr1:213044200-213050600 Strong transcription H9 Cell Line embryonic stem cell
42 chr1:213044400-213049600 Strong transcription ES-I3 Cell Line embryonic stem cell
43 chr1:213044400-213049600 Strong transcription Hela-S3 cervix
44 chr1:213044400-213050000 Strong transcription Primary hematopoietic stem cells blood
45 chr1:213044400-213063200 Weak transcription Placenta Amnion Placenta Amnion
46 chr1:213044600-213050400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:213044600-213052600 Strong transcription H1 Cell Line embryonic stem cell
48 chr1:213044600-213053800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr1:213044800-213049600 Strong transcription A549 lung
50 chr1:213044800-213049800 Strong transcription K562 blood

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Last update: Aug 31, 2015