The 2.0 version of rSNPBase

Variant report

Variant rs11120033
Chromosome Location chr1:212985332-212985333
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212965800-212992600 Weak transcription Lung lung
2 chr1:212966000-212997400 Weak transcription Aorta Aorta
3 chr1:212966400-212985600 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr1:212966400-212988200 Weak transcription Fetal Heart heart
5 chr1:212966400-212989600 Weak transcription Fetal Brain Male brain
6 chr1:212966400-212990200 Weak transcription Right Ventricle heart
7 chr1:212966800-212989600 Weak transcription Psoas Muscle Psoas
8 chr1:212967200-212988400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr1:212967200-212989000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:212967200-212989600 Weak transcription NHLF lung
11 chr1:212968000-212987400 Weak transcription Fetal Intestine Large intestine
12 chr1:212968400-212988000 Weak transcription Stomach Mucosa stomach
13 chr1:212969600-212989000 Weak transcription HepG2 liver
14 chr1:212969600-212993000 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:212970600-212989600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:212971000-212989200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:212971200-212990200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr1:212971400-212987600 Weak transcription Small Intestine intestine
19 chr1:212971400-212987800 Weak transcription A549 lung
20 chr1:212971600-212988000 Weak transcription Fetal Muscle Trunk muscle
21 chr1:212972000-212987800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:212972400-212987800 Weak transcription H1 Cell Line embryonic stem cell
23 chr1:212972400-212993600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:212972600-212988000 Weak transcription H9 Cell Line embryonic stem cell
25 chr1:212972600-212988000 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr1:212972600-212988000 Weak transcription Fetal Intestine Small intestine
27 chr1:212972600-212989800 Weak transcription HSMMtube muscle
28 chr1:212972600-212990200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:212973000-212988600 Strong transcription Primary monocytes fromperipheralblood blood
30 chr1:212975600-212989600 Weak transcription Brain Angular Gyrus brain
31 chr1:212975800-212987200 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr1:212975800-212997800 Weak transcription Brain Substantia Nigra brain
33 chr1:212976000-212989600 Weak transcription HSMM muscle
34 chr1:212976000-212989600 Weak transcription K562 blood
35 chr1:212976000-212990200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr1:212976000-212990200 Weak transcription Fetal Brain Female brain
37 chr1:212976200-212998800 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr1:212978200-212988000 Weak transcription Colon Smooth Muscle Colon
39 chr1:212978200-212988400 Weak transcription Primary hematopoietic stem cells blood
40 chr1:212978200-212989600 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr1:212978200-212989800 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:212978400-212989800 Weak transcription Brain Germinal Matrix brain
43 chr1:212979200-212994200 Weak transcription ES-WA7 Cell Line embryonic stem cell
44 chr1:212979400-212987800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:212979600-212987800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr1:212979600-212989800 Weak transcription Duodenum Mucosa Duodenum
47 chr1:212979600-212992000 Weak transcription Brain Anterior Caudate brain
48 chr1:212979600-212993200 Weak transcription Stomach Smooth Muscle stomach
49 chr1:212979600-213001000 Weak transcription Brain Inferior Temporal Lobe brain
50 chr1:212979800-212988200 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015