The 2.0 version of rSNPBase

Variant report

Variant rs58319854
Chromosome Location chr13:98002880-98002881
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:97982000-98009000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr13:97982600-98020800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr13:97986200-98003200 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr13:97991600-98020800 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr13:97992000-98006200 Weak transcription Psoas Muscle Psoas
6 chr13:97992800-98020800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr13:97994200-98016200 Weak transcription NHDF-Ad bronchial
8 chr13:97995000-98007400 Strong transcription Primary B cells from peripheral blood blood
9 chr13:97995200-98007400 Strong transcription Primary T cells from cord blood blood
10 chr13:97995200-98007800 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr13:97995200-98011000 Strong transcription Placenta Placenta
12 chr13:97995400-98050200 Weak transcription Small Intestine intestine
13 chr13:97995600-98005600 Strong transcription Hela-S3 cervix
14 chr13:97996200-98019400 Weak transcription GM12878-XiMat blood
15 chr13:97996400-98003000 Weak transcription Brain Germinal Matrix brain
16 chr13:97996800-98003600 Strong transcription Skeletal Muscle Female skeletal muscle
17 chr13:97997400-98006400 Weak transcription HMEC breast
18 chr13:97997400-98007800 Strong transcription Adipose Nuclei Adipose
19 chr13:97997400-98011600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr13:97997400-98019000 Weak transcription Muscle Satellite Cultured Cells --
21 chr13:97997600-98008400 Weak transcription K562 blood
22 chr13:97998200-98003600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr13:97998400-98003200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr13:97998400-98007400 Strong transcription Primary monocytes fromperipheralblood blood
25 chr13:97998400-98015800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr13:97998600-98004600 Strong transcription Brain Anterior Caudate brain
27 chr13:97998600-98005000 Strong transcription HUVEC blood vessel
28 chr13:97998600-98006600 Strong transcription Primary T cells fromperipheralblood blood
29 chr13:97998600-98006600 Strong transcription Rectal Mucosa Donor 31 rectum
30 chr13:97998600-98007400 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr13:97998600-98007600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr13:97998800-98003000 Strong transcription Duodenum Mucosa Duodenum
33 chr13:97998800-98003000 Strong transcription Fetal Muscle Trunk muscle
34 chr13:97998800-98003200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr13:97998800-98003200 Strong transcription Osteobl bone
36 chr13:97998800-98003800 Strong transcription Placenta Amnion Placenta Amnion
37 chr13:97998800-98004000 Strong transcription Fetal Adrenal Gland Adrenal Gland
38 chr13:97998800-98004200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
39 chr13:97998800-98004200 Strong transcription Left Ventricle heart
40 chr13:97998800-98005400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr13:97998800-98006000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr13:97998800-98006800 Strong transcription Rectal Mucosa Donor 29 rectum
43 chr13:97999000-98003200 Strong transcription Ovary ovary
44 chr13:97999000-98003400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr13:97999000-98003800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr13:97999000-98003800 Strong transcription Stomach Smooth Muscle stomach
47 chr13:97999000-98004000 Strong transcription Brain Angular Gyrus brain
48 chr13:97999000-98004000 Strong transcription Brain Hippocampus Middle brain
49 chr13:97999000-98004000 Strong transcription Rectal Smooth Muscle rectum
50 chr13:97999000-98005000 Strong transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015