The 2.0 version of rSNPBase

Variant report

Variant rs61649100
Chromosome Location chr13:98029251-98029252
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:97995400-98050200 Weak transcription Small Intestine intestine
2 chr13:98002400-98039600 Weak transcription Spleen Spleen
3 chr13:98015200-98036600 Weak transcription Fetal Heart heart
4 chr13:98020000-98045600 Weak transcription Hela-S3 cervix
5 chr13:98020200-98046000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr13:98020400-98048000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr13:98020800-98031000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr13:98022000-98036600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr13:98022000-98038600 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr13:98022000-98039000 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr13:98022000-98043400 Weak transcription Stomach Mucosa stomach
12 chr13:98022000-98045600 Weak transcription Colonic Mucosa Colon
13 chr13:98022000-98048000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr13:98022200-98033000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr13:98022200-98037200 Weak transcription Muscle Satellite Cultured Cells --
16 chr13:98022200-98038200 Weak transcription Dnd41 blood
17 chr13:98022200-98038600 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr13:98022200-98042600 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr13:98022600-98043800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr13:98023200-98035600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr13:98023400-98041600 Strong transcription Liver Liver
22 chr13:98023600-98029400 Strong transcription Fetal Muscle Trunk muscle
23 chr13:98023600-98029600 Strong transcription Ovary ovary
24 chr13:98023600-98031000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr13:98023600-98035600 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr13:98023600-98045400 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr13:98024000-98044600 Weak transcription GM12878-XiMat blood
28 chr13:98025000-98039200 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr13:98025800-98033200 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr13:98025800-98034400 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr13:98026200-98029400 Weak transcription Fetal Brain Female brain
32 chr13:98026400-98045200 Weak transcription Fetal Brain Male brain
33 chr13:98026800-98030800 Strong transcription Fetal Intestine Large intestine
34 chr13:98026800-98041200 Strong transcription HepG2 liver
35 chr13:98027000-98029400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr13:98027000-98029400 Genic enhancers Brain Anterior Caudate brain
37 chr13:98027000-98029400 Strong transcription Osteobl bone
38 chr13:98027000-98029600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr13:98027000-98030200 Strong transcription Primary B cells from peripheral blood blood
40 chr13:98027200-98029400 Strong transcription Fetal Stomach stomach
41 chr13:98027200-98029400 Strong transcription Left Ventricle heart
42 chr13:98027200-98029400 Strong transcription Rectal Mucosa Donor 29 rectum
43 chr13:98027200-98029400 Strong transcription Stomach Smooth Muscle stomach
44 chr13:98027200-98029400 Strong transcription NHLF lung
45 chr13:98027200-98029600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr13:98027200-98029600 Strong transcription Duodenum Mucosa Duodenum
47 chr13:98027200-98030200 Strong transcription Rectal Mucosa Donor 31 rectum
48 chr13:98027200-98030200 Strong transcription Skeletal Muscle Male skeletal muscle
49 chr13:98027200-98030400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr13:98027200-98040400 Strong transcription Fetal Lung lung

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Last update: Aug 31, 2015