Variant report
Variant | rs58334182 |
---|---|
Chromosome Location | chr4:97357027-97357028 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10007900 | 0.81[ASN][1000 genomes] |
rs10012487 | 0.83[ASN][1000 genomes] |
rs10018197 | 0.83[ASN][1000 genomes] |
rs10021889 | 0.83[ASN][1000 genomes] |
rs10022608 | 0.83[ASN][1000 genomes] |
rs10213429 | 0.81[ASN][1000 genomes] |
rs11097502 | 0.81[ASN][1000 genomes] |
rs11097505 | 0.84[ASN][1000 genomes] |
rs11097514 | 0.84[ASN][1000 genomes] |
rs11932384 | 0.85[ASN][1000 genomes] |
rs11935830 | 0.88[ASN][1000 genomes] |
rs11946434 | 0.82[EUR][1000 genomes] |
rs11946551 | 0.91[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs12639647 | 0.83[ASN][1000 genomes] |
rs12640599 | 0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12642471 | 0.87[ASN][1000 genomes] |
rs12644982 | 0.85[ASN][1000 genomes] |
rs12645609 | 0.84[ASN][1000 genomes] |
rs12645669 | 0.84[ASN][1000 genomes] |
rs12646509 | 0.83[ASN][1000 genomes] |
rs13102896 | 0.83[ASN][1000 genomes] |
rs13104802 | 0.83[ASN][1000 genomes] |
rs13150508 | 0.84[ASN][1000 genomes] |
rs1354704 | 0.85[ASN][1000 genomes] |
rs1354706 | 0.85[ASN][1000 genomes] |
rs1400341 | 0.83[ASN][1000 genomes] |
rs1506304 | 0.84[ASN][1000 genomes] |
rs1506305 | 0.84[ASN][1000 genomes] |
rs1506306 | 0.84[ASN][1000 genomes] |
rs1506319 | 0.84[ASN][1000 genomes] |
rs1516670 | 0.83[ASN][1000 genomes] |
rs1516672 | 0.83[ASN][1000 genomes] |
rs1516676 | 0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs1588981 | 0.84[ASN][1000 genomes] |
rs1605227 | 0.85[ASN][1000 genomes] |
rs17025493 | 0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1847964 | 0.82[AMR][1000 genomes];0.90[ASN][1000 genomes] |
rs1847966 | 0.85[ASN][1000 genomes] |
rs1847969 | 0.81[ASN][1000 genomes] |
rs1911076 | 0.84[ASN][1000 genomes] |
rs1911077 | 0.83[ASN][1000 genomes] |
rs1948912 | 0.88[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs2048022 | 0.81[ASN][1000 genomes] |
rs2090376 | 0.83[ASN][1000 genomes] |
rs2090377 | 0.84[ASN][1000 genomes] |
rs2113973 | 0.85[ASN][1000 genomes] |
rs2174584 | 0.85[ASN][1000 genomes] |
rs2203629 | 0.84[ASN][1000 genomes] |
rs2203631 | 0.83[ASN][1000 genomes] |
rs28407945 | 0.84[ASN][1000 genomes] |
rs28409524 | 0.83[ASN][1000 genomes] |
rs28523416 | 0.84[ASN][1000 genomes] |
rs28565871 | 0.84[ASN][1000 genomes] |
rs28788633 | 0.81[ASN][1000 genomes] |
rs34198564 | 0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs35257138 | 0.84[ASN][1000 genomes] |
rs4146410 | 0.82[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs4146411 | 0.82[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs4299674 | 0.84[ASN][1000 genomes] |
rs4343731 | 0.87[ASN][1000 genomes] |
rs4619895 | 0.84[ASN][1000 genomes] |
rs4699285 | 0.81[ASN][1000 genomes] |
rs4699287 | 0.83[ASN][1000 genomes] |
rs4699288 | 0.89[ASN][1000 genomes] |
rs4699503 | 0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4699512 | 0.89[ASN][1000 genomes] |
rs4699513 | 0.89[ASN][1000 genomes] |
rs4699524 | 0.83[ASN][1000 genomes] |
rs55680326 | 0.89[ASN][1000 genomes] |
rs57499976 | 0.84[ASN][1000 genomes] |
rs59070882 | 0.84[ASN][1000 genomes] |
rs60275360 | 0.87[ASN][1000 genomes] |
rs6532615 | 0.84[ASN][1000 genomes] |
rs6532622 | 0.83[ASN][1000 genomes] |
rs6532623 | 0.83[ASN][1000 genomes] |
rs6816447 | 0.84[ASN][1000 genomes] |
rs6820075 | 0.87[ASN][1000 genomes] |
rs6826069 | 0.84[ASN][1000 genomes] |
rs6827340 | 0.83[ASN][1000 genomes] |
rs6829988 | 0.81[ASN][1000 genomes] |
rs6830120 | 0.85[ASN][1000 genomes] |
rs6832934 | 0.84[ASN][1000 genomes] |
rs6838629 | 0.83[ASN][1000 genomes] |
rs6852663 | 0.84[ASN][1000 genomes] |
rs6855505 | 0.81[ASN][1000 genomes] |
rs6856143 | 0.81[ASN][1000 genomes] |
rs72883800 | 0.85[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs72885446 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs72885485 | 0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs7664207 | 0.84[ASN][1000 genomes] |
rs7667137 | 0.83[ASN][1000 genomes] |
rs7673756 | 0.85[ASN][1000 genomes] |
rs7686174 | 0.85[ASN][1000 genomes] |
rs7688060 | 0.83[ASN][1000 genomes] |
rs7698381 | 0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs9307168 | 0.81[ASN][1000 genomes] |
rs931841 | 0.84[ASN][1000 genomes] |
rs931842 | 0.84[ASN][1000 genomes] |
rs938547 | 0.82[ASN][1000 genomes] |
rs938548 | 0.82[ASN][1000 genomes] |
rs9884259 | 0.81[ASN][1000 genomes] |
rs9884940 | 0.81[ASN][1000 genomes] |
rs9993653 | 0.83[ASN][1000 genomes] |
rs9998383 | 0.84[ASN][1000 genomes] |
rs9999006 | 0.84[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1011487 | chr4:97301762-97393803 | Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
2 | nsv1009685 | chr4:97308301-97392056 | Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Weak transcription | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:97357000-97357400 | Enhancers | HUVEC | blood vessel |