The 2.0 version of rSNPBase

Variant report

Variant rs58750328
Chromosome Location chr1:94428109-94428110
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94422600-94445000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:94423600-94430800 Weak transcription Pancreas Pancrea
3 chr1:94423600-94433200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:94423600-94434800 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr1:94423800-94429400 Weak transcription Aorta Aorta
6 chr1:94425600-94428400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:94425600-94429800 Enhancers Liver Liver
8 chr1:94425600-94435600 Enhancers HMEC breast
9 chr1:94425800-94431200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:94426200-94432400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:94426400-94430200 Weak transcription Placenta Placenta
12 chr1:94426600-94428800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:94426600-94428800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:94426600-94430200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:94426600-94431200 Weak transcription Psoas Muscle Psoas
16 chr1:94427000-94428800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:94427200-94428800 Weak transcription Fetal Intestine Large intestine
18 chr1:94427200-94429400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr1:94427200-94429800 Weak transcription HSMMtube muscle
20 chr1:94427200-94435200 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr1:94427400-94428800 Weak transcription Osteobl bone
22 chr1:94427400-94430400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:94427600-94428600 Weak transcription HepG2 liver
24 chr1:94427600-94429800 Weak transcription NHEK skin
25 chr1:94427800-94429000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:94427800-94429200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:94427800-94430400 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr1:94427800-94430800 Weak transcription Esophagus oesophagus
29 chr1:94428000-94428800 Enhancers A549 lung

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Last update: Aug 31, 2015