The 2.0 version of rSNPBase

Variant report

Variant rs58979783
Chromosome Location chr7:27883331-27883332
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27847600-27885200 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr7:27866000-27884600 Strong transcription Primary B cells from cord blood blood
3 chr7:27870600-27891800 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr7:27871400-27889600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr7:27872800-27886000 Weak transcription HMEC breast
6 chr7:27872800-27890000 Weak transcription Fetal Lung lung
7 chr7:27873800-27886200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr7:27874400-27888600 Weak transcription Brain Angular Gyrus brain
9 chr7:27875200-27913000 Weak transcription Right Atrium heart
10 chr7:27876200-27913000 Weak transcription Fetal Heart heart
11 chr7:27876400-27886200 Weak transcription Muscle Satellite Cultured Cells --
12 chr7:27878800-27884800 Weak transcription Thymus Thymus
13 chr7:27879000-27884800 Weak transcription Fetal Intestine Large intestine
14 chr7:27880000-27891600 Weak transcription Osteobl bone
15 chr7:27880400-27884400 Enhancers Fetal Brain Female brain
16 chr7:27880400-27891000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr7:27880600-27883600 Weak transcription Left Ventricle heart
18 chr7:27880600-27889000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr7:27880600-27903000 Weak transcription Lung lung
20 chr7:27880600-27913600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr7:27880800-27883600 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr7:27880800-27884200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr7:27880800-27895600 Weak transcription Primary monocytes fromperipheralblood blood
24 chr7:27880800-27896600 Weak transcription Spleen Spleen
25 chr7:27880800-27896800 Weak transcription Gastric stomach
26 chr7:27880800-27913200 Weak transcription Aorta Aorta
27 chr7:27881000-27883400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr7:27881000-27905600 Weak transcription Primary T cells fromperipheralblood blood
29 chr7:27881200-27883800 Enhancers Fetal Brain Male brain
30 chr7:27881200-27895800 Weak transcription Primary T cells from cord blood blood
31 chr7:27881400-27883400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr7:27881400-27883400 Enhancers Colon Smooth Muscle Colon
33 chr7:27881600-27883400 Enhancers Placenta Placenta
34 chr7:27881600-27883600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr7:27881600-27884600 Enhancers Fetal Muscle Leg muscle
36 chr7:27881600-27895600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr7:27881800-27883600 Enhancers HUES64 Cell Line embryonic stem cell
38 chr7:27881800-27896600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr7:27882000-27885400 Weak transcription Stomach Smooth Muscle stomach
40 chr7:27882200-27883600 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr7:27882200-27885600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr7:27882600-27883400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr7:27882600-27883400 Enhancers Pancreas Pancrea
44 chr7:27882600-27895400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr7:27882800-27883400 Enhancers NHDF-Ad bronchial
46 chr7:27882800-27885800 Weak transcription Primary B cells from peripheral blood blood
47 chr7:27882800-27886600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr7:27882800-27888800 Weak transcription Brain Cingulate Gyrus brain
49 chr7:27882800-27912000 Weak transcription Brain Anterior Caudate brain
50 chr7:27883000-27883600 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015