The 2.0 version of rSNPBase

Variant report

Variant rs59183152
Chromosome Location chr6:28097912-28097913
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28092800-28101800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:28092800-28103800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:28092800-28103800 Weak transcription Ovary ovary
4 chr6:28092800-28104000 Weak transcription Aorta Aorta
5 chr6:28092800-28104000 Weak transcription Small Intestine intestine
6 chr6:28092800-28104200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr6:28093000-28100200 Weak transcription Brain Anterior Caudate brain
8 chr6:28093000-28100800 Weak transcription Muscle Satellite Cultured Cells --
9 chr6:28093000-28103200 Weak transcription NHLF lung
10 chr6:28093000-28103800 Weak transcription Psoas Muscle Psoas
11 chr6:28093000-28104000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr6:28093000-28104200 Weak transcription Placenta Amnion Placenta Amnion
13 chr6:28093200-28102400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr6:28093200-28103200 Weak transcription HMEC breast
15 chr6:28093200-28103600 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr6:28093400-28098200 Strong transcription iPS-20b Cell Line embryonic stem cell
17 chr6:28093400-28100600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr6:28093400-28102600 Weak transcription NHDF-Ad bronchial
19 chr6:28093400-28103200 Weak transcription NHEK skin
20 chr6:28093400-28103400 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr6:28093600-28098000 Weak transcription Brain Angular Gyrus brain
22 chr6:28093600-28098600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr6:28093600-28098600 Strong transcription iPS-18 Cell Line embryonic stem cell
24 chr6:28093600-28099200 Strong transcription Rectal Mucosa Donor 29 rectum
25 chr6:28093600-28100200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr6:28093600-28101200 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr6:28093600-28101200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr6:28093600-28101400 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr6:28093600-28102200 Weak transcription Brain Substantia Nigra brain
30 chr6:28093600-28102600 Weak transcription Right Ventricle heart
31 chr6:28093600-28103200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr6:28093600-28103200 Weak transcription Right Atrium heart
33 chr6:28093600-28104000 Weak transcription Fetal Intestine Small intestine
34 chr6:28093600-28104200 Weak transcription Pancreas Pancrea
35 chr6:28093600-28104400 Weak transcription Esophagus oesophagus
36 chr6:28093600-28104400 Weak transcription Gastric stomach
37 chr6:28093800-28099600 Strong transcription Fetal Thymus thymus
38 chr6:28093800-28100600 Strong transcription Primary B cells from peripheral blood blood
39 chr6:28093800-28101400 Strong transcription Primary T cells fromperipheralblood blood
40 chr6:28093800-28101600 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr6:28093800-28101600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr6:28093800-28102600 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr6:28093800-28103200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr6:28093800-28104000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr6:28093800-28104200 Weak transcription Lung lung
46 chr6:28094000-28098600 Strong transcription Cortex derived primary cultured neurospheres brain
47 chr6:28094000-28098800 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr6:28094000-28101000 Strong transcription Fetal Muscle Leg muscle
49 chr6:28094000-28101400 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr6:28094200-28101000 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015